Gene annotation
Transcriptome id Sobic.003G248700.1
Synonym Sb03g030510, LKR/SDH, LKR, SDH
Functional annotation saccharopine dehydrogenase, putative, expressed
UniProt A0A1W0VYT1
Pfam PF16653
Panther DB PTHR11133 PTHR11133:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33150 : lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
RAP-DB (Rice) LOC_Os02g54254.1 : saccharopine dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a032999
Brachypodium KQK02069
Barley -
Wheat TraesCS6A02G344000 , TraesCS6A02G344000 , TraesCS6A02G344000 , TraesCS6D02G325100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G348200 expressed protein -
2 Sobic.005G108501 - -
3 Sobic.001G220066 - -
4 Sobic.002G157350 - -
5 Sobic.001G318366 - -
6 Sobic.002G035766 - -
7 Sobic.004G023733 - -
8 Sobic.003G429101 - -
9 Sobic.K042700 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
10 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G248700 Sobic003G248700 Sobic002G348200 Sobic002G348200 Sobic003G248700--Sobic002G348200 Sobic005G108501 Sobic005G108501 Sobic003G248700--Sobic005G108501 Sobic001G220066 Sobic001G220066 Sobic003G248700--Sobic001G220066 Sobic002G157350 Sobic002G157350 Sobic003G248700--Sobic002G157350 Sobic001G318366 Sobic001G318366 Sobic003G248700--Sobic001G318366 Sobic002G035766 Sobic002G035766 Sobic003G248700--Sobic002G035766 Sobic004G023733 Sobic004G023733 Sobic003G248700--Sobic004G023733 Sobic003G429101 Sobic003G429101 Sobic003G248700--Sobic003G429101 SobicK042700 SobicK042700 Sobic003G248700--SobicK042700 Sobic002G348200--Sobic001G220066 Sobic002G348200--Sobic002G157350 Sobic001G272300 Sobic001G272300 Sobic002G348200--Sobic001G272300 Sobic005G108501--Sobic002G348200 Sobic005G108501--Sobic003G248700 Sobic005G108501--Sobic001G220066 Sobic005G108501--Sobic002G157350 Sobic005G108501--Sobic001G318366 Sobic002G081000 Sobic002G081000 Sobic005G108501--Sobic002G081000 Sobic005G108501--Sobic003G429101 Sobic005G108501--Sobic001G272300 Sobic001G220066--Sobic002G157350 Sobic001G220066--Sobic001G272300 Sobic002G157350--Sobic001G220066 Sobic002G157350--Sobic001G272300 Sobic001G530650 Sobic001G530650 Sobic001G318366--Sobic001G530650 Sobic001G497750 Sobic001G497750 Sobic001G318366--Sobic001G497750 Sobic007G005800 Sobic007G005800 Sobic001G318366--Sobic007G005800 Sobic009G147100 Sobic009G147100 Sobic001G318366--Sobic009G147100 Sobic001G318366--Sobic001G272300 Sobic002G035766--Sobic004G023733 Sobic002G035766--Sobic001G272300 Sobic004G023733--Sobic002G035766 Sobic004G023733--Sobic001G272300 Sobic003G046900 Sobic003G046900 Sobic003G429101--Sobic003G046900 Sobic010G212900 Sobic010G212900 Sobic003G429101--Sobic010G212900 Sobic003G429101--Sobic001G220066 Sobic003G429101--Sobic002G348200 Sobic003G429101--Sobic002G157350 Sobic004G196000 Sobic004G196000 Sobic003G429101--Sobic004G196000 Sobic009G214700 Sobic009G214700 Sobic003G429101--Sobic009G214700 Sobic006G149650 Sobic006G149650 Sobic003G429101--Sobic006G149650 Sobic008G192200 Sobic008G192200 Sobic003G429101--Sobic008G192200 SobicK042700--Sobic001G272300
Octagon: transcription factors


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