Gene annotation
Transcriptome id Sobic.004G179100.1
Synonym Sb04g022870
Functional annotation protein transport protein Sec61 subunit alpha isoform 1, putative, expressed
UniProt C5XUV7
Pfam PF00344
Panther DB PTHR10906
NCBI CDD -
KEGG Orthology K10956; protein transport protein SEC61 subunit alpha
Gene Ontology GO:0016020; membrane GO:0015031protein transport


Orthologs (automatic annotation)
TAIR AT1G78720 : SecY protein transport family protein
RAP-DB (Rice) LOC_Os09g17830.1 : protein transport protein Sec61 subunit alpha, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G075301 - -
2 Sobic.009G072066 - -
3 Sobic.002G397001 - -
4 Sobic.001G273600 expressed protein -
5 Sobic.009G248700 C4-dicarboxylate transporter/malic acid transport protein, expressed -
6 Sobic.007G146800 late embryogenesis abundant protein, putative, expressed -
7 Sobic.003G434500 expressed protein -
8 Sobic.006G089200 expressed protein -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic004G179100 Sobic004G179100 Sobic004G075301 Sobic004G075301 Sobic004G179100--Sobic004G075301 Sobic009G072066 Sobic009G072066 Sobic004G179100--Sobic009G072066 Sobic002G397001 Sobic002G397001 Sobic004G179100--Sobic002G397001 Sobic001G273600 Sobic001G273600 Sobic004G179100--Sobic001G273600 Sobic009G248700 Sobic009G248700 Sobic004G179100--Sobic009G248700 Sobic007G146800 Sobic007G146800 Sobic004G179100--Sobic007G146800 Sobic003G434500 Sobic003G434500 Sobic004G179100--Sobic003G434500 Sobic006G089200 Sobic006G089200 Sobic004G179100--Sobic006G089200 Sobic001G018700 Sobic001G018700 Sobic004G179100--Sobic001G018700 Sobic004G075301--Sobic009G072066 Sobic004G075301--Sobic001G018700 Sobic009G072066--Sobic004G075301 Sobic009G072066--Sobic001G018700 Sobic002G397001--Sobic007G146800 Sobic002G397001--Sobic009G072066 Sobic008G082450 Sobic008G082450 Sobic002G397001--Sobic008G082450 Sobic010G140300 Sobic010G140300 Sobic002G397001--Sobic010G140300 Sobic010G090550 Sobic010G090550 Sobic002G397001--Sobic010G090550 Sobic002G397001--Sobic006G089200 Sobic002G397001--Sobic001G018700 Sobic001G273600--Sobic001G018700 Sobic009G248700--Sobic003G434500 Sobic009G248700--Sobic001G273600 Sobic005G167600 Sobic005G167600 Sobic009G248700--Sobic005G167600 Sobic009G037400 Sobic009G037400 Sobic009G248700--Sobic009G037400 Sobic009G248700--Sobic001G018700 Sobic007G146800--Sobic010G140300 Sobic007G146800--Sobic008G082450 Sobic007G146800--Sobic006G089200 Sobic007G146800--Sobic001G018700 Sobic003G434500--Sobic001G273600 Sobic003G434500--Sobic001G018700 Sobic006G089200--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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