Gene annotation
Transcriptome id Sobic.004G224350.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNQ2
Pfam PF07228
Panther DB PTHR12320 PTHR12320:SF10
NCBI CDD KOG1379; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT4G16580 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os02g42270.1 : stage II sporulation protein E, putative, expressed
MaizeGDB (Corn) Zm00025a032077 , Zm00025a032076
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G183900 expressed protein -
2 Sobic.002G032033 - -
3 Sobic.003G090100 seven in absentia protein family domain containing protein, expressed -
4 Sobic.005G207900 zinc knuckle family protein, expressed -
5 Sobic.005G216866 - -
6 Sobic.004G246950 - -
7 Sobic.003G072100 D-mannose binding lectin family protein, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic004G224350 Sobic004G224350 Sobic001G183900 Sobic001G183900 Sobic004G224350--Sobic001G183900 Sobic002G032033 Sobic002G032033 Sobic004G224350--Sobic002G032033 Sobic003G090100 Sobic003G090100 Sobic004G224350--Sobic003G090100 Sobic005G207900 Sobic005G207900 Sobic004G224350--Sobic005G207900 Sobic005G216866 Sobic005G216866 Sobic004G224350--Sobic005G216866 Sobic004G246950 Sobic004G246950 Sobic004G224350--Sobic004G246950 Sobic003G072100 Sobic003G072100 Sobic004G224350--Sobic003G072100 Sobic001G018700 Sobic001G018700 Sobic004G224350--Sobic001G018700 Sobic001G183900--Sobic003G072100 Sobic001G183900--Sobic004G246950 Sobic001G183900--Sobic002G032033 Sobic001G183900--Sobic001G018700 Sobic002G032033--Sobic001G183900 Sobic002G032033--Sobic005G216866 Sobic002G032033--Sobic004G224350 Sobic002G032033--Sobic004G246950 Sobic005G167600 Sobic005G167600 Sobic002G032033--Sobic005G167600 Sobic003G268650 Sobic003G268650 Sobic002G032033--Sobic003G268650 Sobic002G032033--Sobic003G072100 Sobic001G167701 Sobic001G167701 Sobic002G032033--Sobic001G167701 Sobic002G430601 Sobic002G430601 Sobic002G032033--Sobic002G430601 Sobic003G090100--Sobic005G207900 Sobic007G007250 Sobic007G007250 Sobic003G090100--Sobic007G007250 Sobic008G028850 Sobic008G028850 Sobic003G090100--Sobic008G028850 Sobic003G090100--Sobic001G018700 Sobic005G207900--Sobic003G090100 Sobic005G207900--Sobic001G018700 Sobic005G216866--Sobic001G183900 Sobic005G216866--Sobic002G032033 Sobic005G216866--Sobic004G246950 Sobic001G338200 Sobic001G338200 Sobic005G216866--Sobic001G338200 Sobic005G216866--Sobic004G224350 Sobic010G090550 Sobic010G090550 Sobic005G216866--Sobic010G090550 Sobic005G216866--Sobic003G072100 Sobic005G216866--Sobic005G167600 Sobic005G216866--Sobic001G018700 Sobic004G246950--Sobic001G183900 Sobic004G246950--Sobic003G072100 Sobic004G246950--Sobic001G018700 Sobic006G089200 Sobic006G089200 Sobic003G072100--Sobic006G089200 Sobic003G072100--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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