Gene annotation
| Transcriptome id | Sobic.005G014200.1 |
|---|---|
| Synonym | ATWRKY53, Sb05g001220, WRKY53 |
| Functional annotation | WRKY82, expressed |
| UniProt | C5Y3I2 |
| Pfam | PF03106 |
| Panther DB | PTHR31282 PTHR31282:SF25 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity |
Orthologs (automatic annotation)
| TAIR | AT4G23810 : WRKY family transcription factor |
|---|---|
| RAP-DB (Rice) | LOC_Os05g14370.1 : WRKY82, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ92545 , KQJ92546 |
| Barley | HORVU2Hr1G003310.1 , HORVU2Hr1G098280.1 |
| Wheat | TraesCS2D02G051000 , TraesCS5B02G145400 , TraesCS5D02G145700 , TraesCS2A02G021400 , TraesCS2A02G052100 , TraesCS5A02G146600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G046300 | DUF584 domain containing protein, putative, expressed | - |
| 2 | Sobic.001G027000 | expressed protein | - |
| 3 | Sobic.009G201100 | metalloendoproteinase 1 precursor, putative, expressed | - |
| 4 | Sobic.001G220132 | - | - |
| 5 | Sobic.001G220132 | - | - |
| 6 | Sobic.001G220132 | - | - |
| 7 | Sobic.001G220132 | - | - |
| 8 | Sobic.001G220132 | - | - |
| 9 | Sobic.001G220132 | - | - |
| 10 | Sobic.001G220132 | - | - |
| 11 | Sobic.001G220132 | - | - |
| 12 | Sobic.009G196600 | expressed protein | - |
| 13 | Sobic.010G136100 | "kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@- | - |
| 14 | Sobic.003G211266 | - | - |
| 15 | Sobic.004G076900 | - | - |
| 16 | Sobic.008G181250 | - | - |
| 17 | Sobic.005G189800 | - | - |
| 18 | Sobic.005G148100 | - | - |
| 19 | Sobic.009G019700 | - | - |
| 20 | Sobic.003G415200 | DEF1 - Defensin and Defensin-like DEFL family, expressed | - |
Gene co-expression network
Octagon: transcription factors
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