Gene annotation
Transcriptome id Sobic.005G085400.1
Synonym
Functional annotation DNA-directed RNA polymerase subunit beta, putative, expressed
UniProt A0A1B6PR12
Pfam -
Panther DB PTHR34995 PTHR34995:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATCG00170 : DNA-directed RNA polymerase family protein
RAP-DB (Rice) LOC_Os04g16830.1 : DNA-directed RNA polymerase subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a057717 , Zm00025a058064
Brachypodium KQK18165 , PNT61988
Barley HORVU4Hr1G071640.1 , HORVU4Hr1G045370.3 , HORVU4Hr1G045370.1 , HORVU4Hr1G045370.4 , HORVU6Hr1G049130.8 , HORVU6Hr1G049130.7 , HORVU6Hr1G049130.6 , HORVU2Hr1G121970.8 , HORVU2Hr1G121970.6 , AGP50747
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G166401 - -
2 Sobic.005G110445 - -
3 Sobic.003G213300 expressed protein -
4 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
5 Sobic.001G381250 - -
6 Sobic.001G381250 - -
7 Sobic.001G381250 - -
8 Sobic.001G381250 - -
9 Sobic.001G381250 - -
10 Sobic.001G381250 - -
11 Sobic.001G381250 - -
12 Sobic.001G381250 - -
13 Sobic.001G381250 - -
14 Sobic.001G381250 - -
15 Sobic.001G381250 - -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic005G085400 Sobic005G085400 Sobic001G166401 Sobic001G166401 Sobic005G085400--Sobic001G166401 Sobic005G110445 Sobic005G110445 Sobic005G085400--Sobic005G110445 Sobic003G213300 Sobic003G213300 Sobic005G085400--Sobic003G213300 Sobic005G169300 Sobic005G169300 Sobic005G085400--Sobic005G169300 Sobic001G381250 Sobic001G381250 Sobic005G085400--Sobic001G381250 Sobic004G042400 Sobic004G042400 Sobic001G166401--Sobic004G042400 Sobic001G166401--Sobic005G110445 Sobic005G087666 Sobic005G087666 Sobic001G166401--Sobic005G087666 Sobic002G274900 Sobic002G274900 Sobic001G166401--Sobic002G274900 Sobic005G199300 Sobic005G199300 Sobic001G166401--Sobic005G199300 Sobic002G362400 Sobic002G362400 Sobic001G166401--Sobic002G362400 Sobic007G036600 Sobic007G036600 Sobic001G166401--Sobic007G036600 Sobic009G010150 Sobic009G010150 Sobic001G166401--Sobic009G010150 Sobic003G226000 Sobic003G226000 Sobic001G166401--Sobic003G226000 Sobic005G110445--Sobic003G213300 Sobic005G110445--Sobic005G169300 Sobic005G110445--Sobic001G381250 Sobic003G213300--Sobic001G381250 Sobic005G169300--Sobic001G381250 Sobic001G381250--Sobic001G381250
Octagon: transcription factors


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