Gene annotation
Transcriptome id Sobic.005G103100.1
Synonym ORA59
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1B6PRF5
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF3
NCBI CDD -
KEGG Orthology K14516; ethylene-responsive transcription factor 1
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G31230 : ethylene-responsive element binding factor 15
RAP-DB (Rice) LOC_Os09g39850.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046029 , Zm00025a009134 , Zm00025a029639 , Zm00025a009843
Brachypodium PNT62439 , KQJ86112
Barley HORVU4Hr1G079630.1 , HORVU5Hr1G079980.1 , HORVU5Hr1G018720.1 , HORVU2Hr1G103660.2 , HORVU2Hr1G103660.1 , HORVU0Hr1G013490.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G057800 NB-ARC domain containing protein, expressed -
2 Sobic.007G089400 - -
3 Sobic.009G164800 ThiF family domain containing protein, putative, expressed -
4 Sobic.003G255800 expressed protein -
5 Sobic.001G102400 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed -
6 Sobic.004G111400 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.001G028200 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed -
8 Sobic.010G033900 - -
9 Sobic.010G278900 expressed protein -
10 Sobic.005G214300 - -
11 Sobic.001G184950 - -
12 Sobic.006G030500 protein phosphatase 2C, putative, expressed -
13 Sobic.001G331401 - -
14 Sobic.004G187501 - -
15 Sobic.005G214150 - -
16 Sobic.004G024350 - -
17 Sobic.004G230000 expressed protein -
18 Sobic.004G230000 expressed protein -
19 Sobic.004G230000 expressed protein -
20 Sobic.004G230000 expressed protein -


Gene co-expression network
sample Sobic005G103100 Sobic005G103100 Sobic010G057800 Sobic010G057800 Sobic005G103100--Sobic010G057800 Sobic007G089400 Sobic007G089400 Sobic005G103100--Sobic007G089400 Sobic009G164800 Sobic009G164800 Sobic005G103100--Sobic009G164800 Sobic003G255800 Sobic003G255800 Sobic005G103100--Sobic003G255800 Sobic001G102400 Sobic001G102400 Sobic005G103100--Sobic001G102400 Sobic004G111400 Sobic004G111400 Sobic005G103100--Sobic004G111400 Sobic001G028200 Sobic001G028200 Sobic005G103100--Sobic001G028200 Sobic010G033900 Sobic010G033900 Sobic005G103100--Sobic010G033900 Sobic010G278900 Sobic010G278900 Sobic005G103100--Sobic010G278900 Sobic010G057800--Sobic005G103100 Sobic005G214300 Sobic005G214300 Sobic010G057800--Sobic005G214300 Sobic006G030500 Sobic006G030500 Sobic010G057800--Sobic006G030500 Sobic010G057800--Sobic001G102400 Sobic010G046801 Sobic010G046801 Sobic010G057800--Sobic010G046801 Sobic010G057800--Sobic009G164800 Sobic010G057800--Sobic007G089400 Sobic010G057800--Sobic010G033900 Sobic001G184950 Sobic001G184950 Sobic010G057800--Sobic001G184950 Sobic003G069300 Sobic003G069300 Sobic007G089400--Sobic003G069300 Sobic004G230000 Sobic004G230000 Sobic007G089400--Sobic004G230000 Sobic001G244000 Sobic001G244000 Sobic009G164800--Sobic001G244000 Sobic004G129201 Sobic004G129201 Sobic009G164800--Sobic004G129201 Sobic009G164800--Sobic004G230000 Sobic001G319000 Sobic001G319000 Sobic003G255800--Sobic001G319000 Sobic003G255800--Sobic004G111400 Sobic005G097500 Sobic005G097500 Sobic003G255800--Sobic005G097500 Sobic010G046900 Sobic010G046900 Sobic003G255800--Sobic010G046900 Sobic003G403600 Sobic003G403600 Sobic003G255800--Sobic003G403600 Sobic008G126800 Sobic008G126800 Sobic003G255800--Sobic008G126800 Sobic003G255800--Sobic010G278900 Sobic001G321700 Sobic001G321700 Sobic003G255800--Sobic001G321700 Sobic010G193100 Sobic010G193100 Sobic003G255800--Sobic010G193100 Sobic010G117850 Sobic010G117850 Sobic001G102400--Sobic010G117850 Sobic001G102400--Sobic005G103100 Sobic003G192500 Sobic003G192500 Sobic001G102400--Sobic003G192500 Sobic006G227700 Sobic006G227700 Sobic001G102400--Sobic006G227700 Sobic010G120900 Sobic010G120900 Sobic001G102400--Sobic010G120900 Sobic009G152800 Sobic009G152800 Sobic001G102400--Sobic009G152800 Sobic002G190600 Sobic002G190600 Sobic001G102400--Sobic002G190600 Sobic004G301250 Sobic004G301250 Sobic001G102400--Sobic004G301250 Sobic007G202360 Sobic007G202360 Sobic001G102400--Sobic007G202360 Sobic004G111400--Sobic007G089400 Sobic004G111400--Sobic003G255800 Sobic004G111400--Sobic008G126800 Sobic004G111400--Sobic001G319000 Sobic004G111400--Sobic010G278900 Sobic008G081500 Sobic008G081500 Sobic004G111400--Sobic008G081500 Sobic004G111400--Sobic005G097500 Sobic006G113950 Sobic006G113950 Sobic004G111400--Sobic006G113950 Sobic004G111400--Sobic004G129201 Sobic001G126500 Sobic001G126500 Sobic001G028200--Sobic001G126500 Sobic001G028200--Sobic005G103100 Sobic009G111800 Sobic009G111800 Sobic001G028200--Sobic009G111800 Sobic003G089700 Sobic003G089700 Sobic001G028200--Sobic003G089700 Sobic004G109100 Sobic004G109100 Sobic001G028200--Sobic004G109100 Sobic002G025000 Sobic002G025000 Sobic001G028200--Sobic002G025000 Sobic002G130200 Sobic002G130200 Sobic001G028200--Sobic002G130200 Sobic007G149750 Sobic007G149750 Sobic001G028200--Sobic007G149750 Sobic003G401500 Sobic003G401500 Sobic001G028200--Sobic003G401500 Sobic003G344501 Sobic003G344501 Sobic010G033900--Sobic003G344501 Sobic010G033900--Sobic004G230000 Sobic005G187800 Sobic005G187800 Sobic010G278900--Sobic005G187800 Sobic002G232300 Sobic002G232300 Sobic010G278900--Sobic002G232300 Sobic008G007500 Sobic008G007500 Sobic010G278900--Sobic008G007500 Sobic001G259850 Sobic001G259850 Sobic010G278900--Sobic001G259850 Sobic008G029000 Sobic008G029000 Sobic010G278900--Sobic008G029000 Sobic010G018200 Sobic010G018200 Sobic010G278900--Sobic010G018200 Sobic005G199151 Sobic005G199151 Sobic010G278900--Sobic005G199151 Sobic004G351000 Sobic004G351000 Sobic010G278900--Sobic004G351000 Sobic003G003300 Sobic003G003300 Sobic010G278900--Sobic003G003300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.