Gene annotation
Transcriptome id Sobic.005G112400.1
Synonym Sb05g013840
Functional annotation cysteine protease 1 precursor, putative, expressed
UniProt C5Y289
Pfam PF08246 PF00112
Panther DB PTHR12411 PTHR12411:SF401
NCBI CDD KOG1543; Cysteine proteinase Cathepsin L
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G29090 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os07g01800.1 : cysteine proteinase EP-B 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a029759 , Zm00025a029757
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G216866 - -
2 Sobic.001G338200 RNA-directed DNA polymerase, putative, expressed -
3 Sobic.010G090550 - -
4 Sobic.001G183900 expressed protein -
5 Sobic.003G021700 flavonol synthase/flavanone 3-hydroxylase, putative, expressed K05278: flavonol synthase
6 Sobic.002G032033 - -
7 Sobic.005G191000 MBTB68 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.003G072100 D-mannose binding lectin family protein, expressed -
9 Sobic.004G246950 - -
10 Sobic.001G495100 expressed protein -
11 Sobic.004G224350 - -
12 Sobic.007G146800 late embryogenesis abundant protein, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic005G112400 Sobic005G112400 Sobic005G216866 Sobic005G216866 Sobic005G112400--Sobic005G216866 Sobic001G338200 Sobic001G338200 Sobic005G112400--Sobic001G338200 Sobic010G090550 Sobic010G090550 Sobic005G112400--Sobic010G090550 Sobic001G183900 Sobic001G183900 Sobic005G112400--Sobic001G183900 Sobic003G021700 Sobic003G021700 Sobic005G112400--Sobic003G021700 Sobic002G032033 Sobic002G032033 Sobic005G112400--Sobic002G032033 Sobic005G191000 Sobic005G191000 Sobic005G112400--Sobic005G191000 Sobic003G072100 Sobic003G072100 Sobic005G112400--Sobic003G072100 Sobic004G246950 Sobic004G246950 Sobic005G112400--Sobic004G246950 Sobic005G216866--Sobic001G183900 Sobic005G216866--Sobic002G032033 Sobic005G216866--Sobic004G246950 Sobic005G216866--Sobic001G338200 Sobic004G224350 Sobic004G224350 Sobic005G216866--Sobic004G224350 Sobic005G216866--Sobic010G090550 Sobic005G216866--Sobic003G072100 Sobic005G167600 Sobic005G167600 Sobic005G216866--Sobic005G167600 Sobic001G018700 Sobic001G018700 Sobic005G216866--Sobic001G018700 Sobic001G338200--Sobic010G090550 Sobic001G338200--Sobic001G018700 Sobic010G090550--Sobic001G338200 Sobic010G090550--Sobic001G018700 Sobic001G183900--Sobic003G072100 Sobic001G183900--Sobic004G246950 Sobic001G183900--Sobic002G032033 Sobic001G183900--Sobic001G018700 Sobic001G495100 Sobic001G495100 Sobic003G021700--Sobic001G495100 Sobic007G146800 Sobic007G146800 Sobic003G021700--Sobic007G146800 Sobic003G021700--Sobic001G018700 Sobic002G032033--Sobic001G183900 Sobic002G032033--Sobic005G216866 Sobic002G032033--Sobic004G224350 Sobic002G032033--Sobic004G246950 Sobic002G032033--Sobic005G167600 Sobic003G268650 Sobic003G268650 Sobic002G032033--Sobic003G268650 Sobic002G032033--Sobic003G072100 Sobic001G167701 Sobic001G167701 Sobic002G032033--Sobic001G167701 Sobic002G430601 Sobic002G430601 Sobic002G032033--Sobic002G430601 Sobic005G191000--Sobic001G338200 Sobic005G191000--Sobic010G090550 Sobic003G384650 Sobic003G384650 Sobic005G191000--Sobic003G384650 Sobic003G066200 Sobic003G066200 Sobic005G191000--Sobic003G066200 Sobic002G099500 Sobic002G099500 Sobic005G191000--Sobic002G099500 Sobic003G178101 Sobic003G178101 Sobic005G191000--Sobic003G178101 Sobic005G077666 Sobic005G077666 Sobic005G191000--Sobic005G077666 Sobic005G191000--Sobic001G018700 Sobic006G089200 Sobic006G089200 Sobic003G072100--Sobic006G089200 Sobic003G072100--Sobic001G018700 Sobic004G246950--Sobic001G183900 Sobic004G246950--Sobic003G072100 Sobic004G246950--Sobic001G018700
Octagon: transcription factors


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