Gene annotation
Transcriptome id Sobic.006G053500.1,Sobic.006G053500.2
Synonym ATRMI1, RMI1, Sb06g014000, BLAP75
Functional annotation expressed protein
UniProt A0A1Z5RD45 , C5YEU1
Pfam PF08585 PF16099
Panther DB PTHR14790 PTHR14790:SF15
NCBI CDD -
KEGG Orthology K10990; RMI1, RecQ-mediated genome instability protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63540 : Domain of unknown function (DUF1767)
RAP-DB (Rice) LOC_Os04g32090.1 : expressed protein
MaizeGDB (Corn) Zm00025a011741
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G034250 - -
2 Sobic.008G154000 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.003G091100 seven in absentia protein family domain containing protein, expressed -
4 Sobic.010G229200 - -
5 Sobic.001G218701 - -
6 Sobic.007G024900 OsWAK110 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.007G100275 - -
8 Sobic.003G058400 annexin, putative, expressed -
9 Sobic.K042700 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
10 Sobic.002G081000 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G053500 Sobic006G053500 Sobic003G034250 Sobic003G034250 Sobic006G053500--Sobic003G034250 Sobic008G154000 Sobic008G154000 Sobic006G053500--Sobic008G154000 Sobic003G091100 Sobic003G091100 Sobic006G053500--Sobic003G091100 Sobic010G229200 Sobic010G229200 Sobic006G053500--Sobic010G229200 Sobic001G218701 Sobic001G218701 Sobic006G053500--Sobic001G218701 Sobic007G024900 Sobic007G024900 Sobic006G053500--Sobic007G024900 Sobic007G100275 Sobic007G100275 Sobic006G053500--Sobic007G100275 Sobic003G058400 Sobic003G058400 Sobic006G053500--Sobic003G058400 SobicK042700 SobicK042700 Sobic006G053500--SobicK042700 Sobic003G034250--Sobic008G154000 Sobic001G272300 Sobic001G272300 Sobic003G034250--Sobic001G272300 Sobic008G154000--Sobic001G272300 Sobic003G091100--SobicK042700 Sobic003G091100--Sobic001G272300 Sobic010G229200--Sobic007G024900 Sobic010G229200--Sobic001G272300 Sobic001G218701--Sobic001G272300 Sobic007G024900--Sobic010G229200 Sobic007G024900--Sobic001G272300 Sobic007G100275--Sobic003G091100 Sobic007G100275--SobicK042700 Sobic009G150100 Sobic009G150100 Sobic007G100275--Sobic009G150100 Sobic007G100275--Sobic001G272300 Sobic003G058400--Sobic001G272300 SobicK042700--Sobic001G272300
Octagon: transcription factors


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