Gene annotation
Transcriptome id Sobic.006G254900.1
Synonym PGA6, Sb06g031880, WUS1, WUS
Functional annotation homeobox domain containing protein, expressed
UniProt A0A1Z5RFI9
Pfam PF00046
Panther DB PTHR24326 PTHR24326:SF123
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT2G17950 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os04g56780.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009417 , Zm00025a040785 , Zm00025a012986 , Zm00025a057205 , Zm00025a033532 , Zm00025a026819 , Zm00025a039612 , Zm00025a026917
Brachypodium KQJ85141 , KQJ84981 , KQJ92701 , KQK10633 , KQK07789
Barley HORVU1Hr1G010580.3 , HORVU1Hr1G010580.2 , HORVU1Hr1G010580.1 , HORVU3Hr1G085050.1 , HORVU3Hr1G085050.3 , HORVU3Hr1G085050.4 , HORVU3Hr1G086450.1 , HORVU5Hr1G049190.2 , HORVU5Hr1G049190.3 , HORVU5Hr1G049190.1 , HORVU2Hr1G113820.8 , HORVU5Hr1G022120.1 , HORVU2Hr1G113820.2 , HORVU2Hr1G113820.5 , HORVU2Hr1G113820.4 , HORVU2Hr1G113820.7
Wheat TraesCS5D02G097400 , TraesCS3D02G352500 , TraesCS1B02G069000 , TraesCS3B02G399800 , TraesCS2D02G515600 , TraesCS2A02G514000 , TraesCS5A02G085000 , TraesCS3D02G361100 , TraesCS3B02G391100 , TraesCS2B02G542600 , TraesCS5D02G162600 , TraesCS3A02G368100 , TraesCS1D02G054000 , TraesCS3A02G358200 , TraesCS5B02G156400 , TraesCS1A02G052000 , TraesCS3D02G352600 , TraesCS2A02G491900 , TraesCS5A02G157300 , TraesCS5B02G091000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G061500 ulp1 protease family protein, putative, expressed -
2 Sobic.003G081200 expressed protein -
3 Sobic.004G221200 - -
4 Sobic.003G344501 - -
5 Sobic.004G230000 expressed protein -
6 Sobic.004G230000 expressed protein -
7 Sobic.004G230000 expressed protein -
8 Sobic.004G230000 expressed protein -
9 Sobic.004G230000 expressed protein -
10 Sobic.004G230000 expressed protein -
11 Sobic.004G230000 expressed protein -
12 Sobic.004G230000 expressed protein -
13 Sobic.005G081200 DEFL33 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.002G125400 - -
15 Sobic.003G069300 transferase family protein, putative, expressed -
16 Sobic.004G024350 - -
17 Sobic.004G129201 - -
18 Sobic.002G027401 - -
19 Sobic.010G033900 - -
20 Sobic.005G165201 - -


Gene co-expression network
sample Sobic006G254900 Sobic006G254900 Sobic006G061500 Sobic006G061500 Sobic006G254900--Sobic006G061500 Sobic003G081200 Sobic003G081200 Sobic006G254900--Sobic003G081200 Sobic004G221200 Sobic004G221200 Sobic006G254900--Sobic004G221200 Sobic003G344501 Sobic003G344501 Sobic006G254900--Sobic003G344501 Sobic004G230000 Sobic004G230000 Sobic006G254900--Sobic004G230000 Sobic006G061500--Sobic004G230000 Sobic006G061500--Sobic003G344501 Sobic009G147450 Sobic009G147450 Sobic003G081200--Sobic009G147450 Sobic001G343700 Sobic001G343700 Sobic003G081200--Sobic001G343700 Sobic004G024350 Sobic004G024350 Sobic003G081200--Sobic004G024350 Sobic003G081200--Sobic004G230000 Sobic002G125400 Sobic002G125400 Sobic004G221200--Sobic002G125400 Sobic004G221200--Sobic006G061500 Sobic004G221200--Sobic003G344501 Sobic004G221200--Sobic004G230000 Sobic003G344501--Sobic004G230000 Sobic003G344501--Sobic006G061500 Sobic004G230000--Sobic004G230000 Sobic004G230000--Sobic003G344501 Sobic004G230000--Sobic006G061500
Octagon: transcription factors


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