Gene annotation
Transcriptome id Sobic.007G116700.1,Sobic.007G116700.2
Synonym Sb07g019260
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1B6PHC9 , A0A1B6PHH9
Pfam PF08240 PF00107 PF08240 PF13602
Panther DB PTHR11695 PTHR11695:SF552
NCBI CDD KOG0023; Alcohol dehydrogenase, class V KOG1198Zinc-binding oxidoreductase
KEGG Orthology K18980; EO, 2-methylene-furan-3-one reductase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G23740 : Oxidoreductase, zinc-binding dehydrogenase family protein
RAP-DB (Rice) LOC_Os08g29170.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a006110
Brachypodium KQJ98118
Barley HORVU6Hr1G025630.2 , HORVU6Hr1G025630.1 , HORVU6Hr1G025730.2 , HORVU6Hr1G025730.1
Wheat TraesCS6D02G122800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G055000 bZIP transcription factor domain containing protein, expressed -
2 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
3 Sobic.010G011500 - -
4 Sobic.004G296750 - -
5 Sobic.001G480900 glyoxalase family protein, putative, expressed -
6 Sobic.006G049633 - -
7 Sobic.008G061900 - -
8 Sobic.003G337900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY21, expressed -
9 Sobic.003G281000 - -
10 Sobic.003G229900 - -
11 Sobic.008G030801 - -
12 Sobic.006G247200 AMP-binding enzyme, putative, expressed -
13 Sobic.002G266700 - -
14 Sobic.002G202050 - -
15 Sobic.002G202050 - -
16 Sobic.002G202050 - -
17 Sobic.002G202050 - -
18 Sobic.003G111700 - -
19 Sobic.010G143666 - -
20 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G116700 Sobic007G116700 Sobic002G055000 Sobic002G055000 Sobic007G116700--Sobic002G055000 Sobic006G161200 Sobic006G161200 Sobic007G116700--Sobic006G161200 Sobic010G011500 Sobic010G011500 Sobic007G116700--Sobic010G011500 Sobic004G296750 Sobic004G296750 Sobic007G116700--Sobic004G296750 Sobic001G480900 Sobic001G480900 Sobic007G116700--Sobic001G480900 Sobic006G049633 Sobic006G049633 Sobic007G116700--Sobic006G049633 Sobic008G061900 Sobic008G061900 Sobic007G116700--Sobic008G061900 Sobic003G337900 Sobic003G337900 Sobic007G116700--Sobic003G337900 Sobic003G281000 Sobic003G281000 Sobic007G116700--Sobic003G281000 Sobic002G055000--Sobic001G480900 Sobic002G055000--Sobic010G011500 Sobic002G055000--Sobic004G296750 Sobic002G055000--Sobic006G049633 Sobic002G055000--Sobic003G281000 Sobic001G297900 Sobic001G297900 Sobic002G055000--Sobic001G297900 Sobic002G266700 Sobic002G266700 Sobic002G055000--Sobic002G266700 Sobic003G229900 Sobic003G229900 Sobic002G055000--Sobic003G229900 Sobic008G030801 Sobic008G030801 Sobic002G055000--Sobic008G030801 Sobic006G161200--Sobic008G030801 Sobic006G161200--Sobic003G229900 Sobic001G273950 Sobic001G273950 Sobic006G161200--Sobic001G273950 Sobic006G161200--Sobic006G049633 Sobic006G161200--Sobic002G055000 Sobic006G161200--Sobic010G011500 Sobic006G161200--Sobic008G061900 Sobic010G215201 Sobic010G215201 Sobic006G161200--Sobic010G215201 Sobic005G205100 Sobic005G205100 Sobic006G161200--Sobic005G205100 Sobic010G011500--Sobic002G055000 Sobic010G011500--Sobic001G480900 Sobic010G011500--Sobic004G296750 Sobic010G011500--Sobic003G281000 Sobic010G011500--Sobic006G049633 Sobic010G011500--Sobic002G266700 Sobic010G011500--Sobic001G297900 Sobic010G011500--Sobic003G229900 Sobic010G011500--Sobic008G030801 Sobic004G296750--Sobic001G480900 Sobic004G296750--Sobic002G055000 Sobic004G296750--Sobic003G281000 Sobic004G296750--Sobic006G049633 Sobic004G296750--Sobic010G011500 Sobic004G296750--Sobic002G266700 Sobic002G202050 Sobic002G202050 Sobic004G296750--Sobic002G202050 Sobic001G480900--Sobic002G055000 Sobic001G480900--Sobic004G296750 Sobic001G480900--Sobic010G011500 Sobic001G480900--Sobic003G281000 Sobic001G480900--Sobic006G049633 Sobic001G480900--Sobic002G266700 Sobic001G480900--Sobic001G297900 Sobic001G480900--Sobic003G229900 Sobic001G480900--Sobic008G061900 Sobic006G049633--Sobic003G229900 Sobic006G049633--Sobic002G055000 Sobic006G049633--Sobic004G296750 Sobic006G049633--Sobic001G480900 Sobic006G049633--Sobic002G266700 Sobic006G049633--Sobic010G011500 Sobic006G049633--Sobic008G061900 Sobic006G049633--Sobic003G281000 Sobic007G007100 Sobic007G007100 Sobic006G049633--Sobic007G007100 Sobic008G061900--Sobic006G049633 Sobic008G061900--Sobic003G229900 Sobic008G061900--Sobic004G296750 Sobic008G061900--Sobic002G055000 Sobic008G061900--Sobic001G480900 Sobic008G061900--Sobic010G011500 Sobic008G061900--Sobic002G266700 Sobic008G061900--Sobic008G030801 Sobic008G061900--Sobic001G297900 Sobic003G337900--Sobic006G161200 Sobic003G438100 Sobic003G438100 Sobic003G337900--Sobic003G438100 Sobic003G337900--Sobic005G205100 Sobic010G168100 Sobic010G168100 Sobic003G337900--Sobic010G168100 Sobic003G337900--Sobic007G116700 Sobic003G337900--Sobic008G061900 Sobic001G310000 Sobic001G310000 Sobic003G337900--Sobic001G310000 Sobic003G337900--Sobic010G011500 Sobic003G337900--Sobic004G296750 Sobic003G281000--Sobic004G296750 Sobic010G143666 Sobic010G143666 Sobic003G281000--Sobic010G143666 Sobic003G281000--Sobic001G480900 Sobic002G014100 Sobic002G014100 Sobic003G281000--Sobic002G014100 Sobic003G281000--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic003G281000--Sobic006G247200
Octagon: transcription factors


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