Gene annotation
| Transcriptome id | Sobic.007G117200.1 |
|---|---|
| Synonym | Sb07g019340 |
| Functional annotation | expressed protein |
| UniProt | C5YKL0 |
| Pfam | PF02668 |
| Panther DB | PTHR10696 PTHR10696:SF29 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016491; oxidoreductase activity |
Orthologs (automatic annotation)
| TAIR | AT3G21360 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g29510.1 : expressed protein |
| MaizeGDB (Corn) | - |
| Brachypodium | PNT68030 , KQJ89872 |
| Barley | HORVU5Hr1G056300.4 , HORVU5Hr1G056300.3 , HORVU5Hr1G056300.2 , HORVU5Hr1G056300.1 , HORVU2Hr1G088620.1 , HORVU2Hr1G088620.2 , HORVU0Hr1G012680.2 , HORVU0Hr1G012680.1 |
| Wheat | TraesCS5A02G185300 , TraesCS5D02G190300 , TraesCS2D02G364400 , TraesCS5B02G183300 , TraesCS2A02G367600 , TraesCS2B02G385000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G379800 | OsFBX72 - F-box domain containing protein, expressed | - |
| 2 | Sobic.004G196000 | late embryogenesis abundant protein D-34, putative, expressed | - |
| 3 | Sobic.008G192100 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 4 | Sobic.004G048600 | coiled-coil domain-containing protein 72, putative, expressed | - |
| 5 | Sobic.001G493300 | glycerol-3-phosphate acyltransferase, putative, expressed | - |
| 6 | Sobic.007G154901 | - | K01674: carbonic anhydrase |
| 7 | Sobic.006G053500 | expressed protein | K10990: RMI1, RecQ-mediated genome instability protein 1 |
| 8 | Sobic.003G091100 | seven in absentia protein family domain containing protein, expressed | - |
| 9 | Sobic.008G192200 | - | - |
| 10 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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