Gene annotation
Transcriptome id Sobic.007G200400.1
Synonym lateral organ boundaries, Sb07g026800, SbLBD25, LBD4
Functional annotation "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1Z5RAU0
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26660 : LOB domain-containing protein 24
RAP-DB (Rice) LOC_Os03g57670.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244850 - -
2 Sobic.001G325100 DUF623 domain containing protein, expressed -
3 Sobic.002G075400 receptor kinase, putative, expressed -
4 Sobic.003G233332 - -
5 Sobic.009G078401 - -
6 Sobic.002G325000 O-methyltransferase, putative, expressed -
7 Sobic.008G138850 - -
8 Sobic.001G250800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
9 Sobic.009G078300 expressed protein -
10 Sobic.010G252301 - -
11 Sobic.010G045966 - -
12 Sobic.005G148300 - -
13 Sobic.005G110350 - -
14 Sobic.002G025900 expressed protein -
15 Sobic.009G195100 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
16 Sobic.004G039000 expressed protein -
17 Sobic.009G255400 expressed protein -
18 Sobic.008G053500 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
19 Sobic.007G013700 - -
20 Sobic.005G183900 pleiotropic drug resistance protein, putative, expressed -


Gene co-expression network
sample Sobic007G200400 Sobic007G200400 Sobic003G244850 Sobic003G244850 Sobic007G200400--Sobic003G244850 Sobic001G325100 Sobic001G325100 Sobic007G200400--Sobic001G325100 Sobic002G075400 Sobic002G075400 Sobic007G200400--Sobic002G075400 Sobic003G233332 Sobic003G233332 Sobic007G200400--Sobic003G233332 Sobic009G078401 Sobic009G078401 Sobic007G200400--Sobic009G078401 Sobic002G325000 Sobic002G325000 Sobic007G200400--Sobic002G325000 Sobic008G138850 Sobic008G138850 Sobic007G200400--Sobic008G138850 Sobic001G250800 Sobic001G250800 Sobic007G200400--Sobic001G250800 Sobic009G078300 Sobic009G078300 Sobic007G200400--Sobic009G078300 Sobic003G244850--Sobic008G138850 Sobic003G244850--Sobic009G078401 Sobic003G244850--Sobic002G075400 Sobic003G244850--Sobic001G325100 Sobic009G195100 Sobic009G195100 Sobic003G244850--Sobic009G195100 Sobic003G244850--Sobic009G078300 Sobic003G244850--Sobic007G200400 Sobic009G255400 Sobic009G255400 Sobic003G244850--Sobic009G255400 Sobic004G278800 Sobic004G278800 Sobic003G244850--Sobic004G278800 Sobic008G053500 Sobic008G053500 Sobic001G325100--Sobic008G053500 Sobic001G325100--Sobic008G138850 Sobic001G325100--Sobic002G075400 Sobic010G045966 Sobic010G045966 Sobic001G325100--Sobic010G045966 Sobic006G199601 Sobic006G199601 Sobic001G325100--Sobic006G199601 Sobic001G325100--Sobic009G078401 Sobic001G279800 Sobic001G279800 Sobic001G325100--Sobic001G279800 Sobic010G055900 Sobic010G055900 Sobic001G325100--Sobic010G055900 Sobic001G325100--Sobic009G255400 Sobic002G075400--Sobic009G078401 Sobic002G075400--Sobic008G138850 Sobic002G075400--Sobic001G325100 Sobic002G075400--Sobic009G078300 Sobic002G075400--Sobic002G325000 Sobic002G075400--Sobic010G045966 Sobic002G075400--Sobic009G255400 Sobic002G075400--Sobic003G244850 Sobic002G075400--Sobic004G278800 Sobic003G233332--Sobic001G325100 Sobic003G068200 Sobic003G068200 Sobic003G233332--Sobic003G068200 Sobic003G254850 Sobic003G254850 Sobic003G233332--Sobic003G254850 Sobic005G019300 Sobic005G019300 Sobic003G233332--Sobic005G019300 Sobic002G316400 Sobic002G316400 Sobic003G233332--Sobic002G316400 Sobic003G233332--Sobic001G279800 Sobic005G024500 Sobic005G024500 Sobic003G233332--Sobic005G024500 Sobic003G233332--Sobic008G053500 Sobic003G233332--Sobic008G138850 Sobic009G078401--Sobic009G078300 Sobic009G078401--Sobic008G138850 Sobic009G078401--Sobic002G075400 Sobic009G078401--Sobic004G278800 Sobic008G174200 Sobic008G174200 Sobic009G078401--Sobic008G174200 Sobic002G168700 Sobic002G168700 Sobic009G078401--Sobic002G168700 Sobic003G059450 Sobic003G059450 Sobic009G078401--Sobic003G059450 Sobic001G235600 Sobic001G235600 Sobic009G078401--Sobic001G235600 Sobic009G078401--Sobic001G325100 Sobic004G039000 Sobic004G039000 Sobic002G325000--Sobic004G039000 Sobic010G252301 Sobic010G252301 Sobic002G325000--Sobic010G252301 Sobic002G025900 Sobic002G025900 Sobic002G325000--Sobic002G025900 Sobic002G325000--Sobic010G045966 Sobic002G325000--Sobic002G075400 Sobic002G325000--Sobic001G325100 Sobic005G183900 Sobic005G183900 Sobic002G325000--Sobic005G183900 Sobic007G134700 Sobic007G134700 Sobic002G325000--Sobic007G134700 Sobic002G325000--Sobic003G254850 Sobic008G138850--Sobic009G078401 Sobic008G138850--Sobic009G078300 Sobic008G138850--Sobic009G255400 Sobic008G138850--Sobic005G024500 Sobic008G138850--Sobic001G325100 Sobic008G138850--Sobic004G278800 Sobic008G138850--Sobic005G019300 Sobic008G138850--Sobic002G075400 Sobic003G441301 Sobic003G441301 Sobic008G138850--Sobic003G441301 Sobic001G325500 Sobic001G325500 Sobic001G250800--Sobic001G325500 Sobic001G137050 Sobic001G137050 Sobic001G250800--Sobic001G137050 Sobic001G250800--Sobic010G252301 Sobic004G101800 Sobic004G101800 Sobic001G250800--Sobic004G101800 Sobic001G250800--Sobic010G045966 Sobic009G244450 Sobic009G244450 Sobic001G250800--Sobic009G244450 Sobic001G250800--Sobic002G025900 Sobic001G250800--Sobic003G244850 Sobic001G001066 Sobic001G001066 Sobic001G250800--Sobic001G001066 Sobic009G078300--Sobic009G078401 Sobic009G078300--Sobic008G138850 Sobic009G078300--Sobic001G235600 Sobic002G018200 Sobic002G018200 Sobic009G078300--Sobic002G018200 Sobic009G078300--Sobic008G174200 Sobic009G078300--Sobic002G168700 Sobic003G263450 Sobic003G263450 Sobic009G078300--Sobic003G263450 Sobic009G078300--Sobic004G278800 Sobic003G373050 Sobic003G373050 Sobic009G078300--Sobic003G373050
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.