Gene annotation
Transcriptome id Sobic.001G297600.1,Sobic.001G297600.2
Synonym Sb01g029030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt A0A1Z5S881 , C5WSC1
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF179
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G61520 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os10g41190.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a051962
Brachypodium KQK24152 , PNT67889 , KQJ97806 , PNT67890
Barley HORVU4Hr1G088650.1 , HORVU4Hr1G088650.24 , HORVU4Hr1G088650.22 , HORVU4Hr1G088650.23 , HORVU4Hr1G088650.20 , HORVU4Hr1G088650.21 , HORVU1Hr1G056010.10 , HORVU4Hr1G088650.19 , HORVU4Hr1G088650.18 , HORVU4Hr1G088650.16 , HORVU4Hr1G088650.15 , HORVU4Hr1G088650.14 , HORVU4Hr1G088650.13 , HORVU4Hr1G088650.12 , HORVU4Hr1G088650.11 , HORVU1Hr1G056010.9 , HORVU1Hr1G056010.8 , HORVU1Hr1G056010.3 , HORVU1Hr1G056010.2 , HORVU1Hr1G056010.1 , HORVU1Hr1G056010.7 , HORVU1Hr1G056010.6 , HORVU1Hr1G056010.5 , HORVU1Hr1G056010.4 , HORVU4Hr1G088650.2 , HORVU4Hr1G088650.25
Wheat TraesCS4B02G371700 , TraesCS4B02G371700 , TraesCS4D02G365800 , TraesCS1D02G221100 , TraesCS1B02G232900 , TraesCS5A02G542600 , TraesCS5A02G542600 , TraesCS1A02G219500
Populus -


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cDNA sequences
Sobic.001G297600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G069700 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
2 Sobic.002G029200 - -
3 Sobic.008G154400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.007G108000 - -
5 Sobic.005G003001 - -
6 Sobic.006G054400 expressed protein -
7 Sobic.008G176600 expressed protein -
8 Sobic.001G203100 expressed protein -
9 Sobic.008G087100 DNA-binding storekeeper protein-related, putative, expressed -
10 Sobic.K043500 MYB family transcription factor, putative, expressed -
11 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
12 Sobic.006G124100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
13 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
14 Sobic.010G095300 - -
15 Sobic.001G326000 expressed protein -
16 Sobic.003G101100 no apical meristem protein, putative, expressed -
17 Sobic.005G112066 - -
18 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
19 Sobic.003G438700 AWPM-19-like membrane family protein, putative, expressed -
20 Sobic.004G313800 - -


Gene co-expression network
sample Sobic001G297600 Sobic001G297600 Sobic010G069700 Sobic010G069700 Sobic001G297600--Sobic010G069700 Sobic002G029200 Sobic002G029200 Sobic001G297600--Sobic002G029200 Sobic008G154400 Sobic008G154400 Sobic001G297600--Sobic008G154400 Sobic007G108000 Sobic007G108000 Sobic001G297600--Sobic007G108000 Sobic005G003001 Sobic005G003001 Sobic001G297600--Sobic005G003001 Sobic006G054400 Sobic006G054400 Sobic001G297600--Sobic006G054400 Sobic008G176600 Sobic008G176600 Sobic001G297600--Sobic008G176600 Sobic001G203100 Sobic001G203100 Sobic001G297600--Sobic001G203100 Sobic008G087100 Sobic008G087100 Sobic001G297600--Sobic008G087100 Sobic010G069700--Sobic005G003001 Sobic006G080200 Sobic006G080200 Sobic010G069700--Sobic006G080200 Sobic010G069700--Sobic001G203100 Sobic001G220600 Sobic001G220600 Sobic010G069700--Sobic001G220600 Sobic002G282800 Sobic002G282800 Sobic010G069700--Sobic002G282800 Sobic010G069700--Sobic008G154400 Sobic001G059800 Sobic001G059800 Sobic010G069700--Sobic001G059800 Sobic010G274300 Sobic010G274300 Sobic010G069700--Sobic010G274300 Sobic002G018250 Sobic002G018250 Sobic010G069700--Sobic002G018250 Sobic010G216800 Sobic010G216800 Sobic002G029200--Sobic010G216800 Sobic007G172800 Sobic007G172800 Sobic002G029200--Sobic007G172800 Sobic006G059900 Sobic006G059900 Sobic002G029200--Sobic006G059900 Sobic002G029200--Sobic010G274300 Sobic001G166500 Sobic001G166500 Sobic002G029200--Sobic001G166500 Sobic002G029200--Sobic008G154400 Sobic009G061800 Sobic009G061800 Sobic002G029200--Sobic009G061800 Sobic002G029200--Sobic001G203100 Sobic002G029200--Sobic007G108000 Sobic001G326000 Sobic001G326000 Sobic008G154400--Sobic001G326000 Sobic009G186400 Sobic009G186400 Sobic008G154400--Sobic009G186400 SobicK043500 SobicK043500 Sobic008G154400--SobicK043500 Sobic008G154400--Sobic006G059900 Sobic002G077500 Sobic002G077500 Sobic008G154400--Sobic002G077500 Sobic003G105600 Sobic003G105600 Sobic008G154400--Sobic003G105600 Sobic003G438700 Sobic003G438700 Sobic008G154400--Sobic003G438700 Sobic008G154400--Sobic007G108000 Sobic004G313800 Sobic004G313800 Sobic008G154400--Sobic004G313800 Sobic007G108000--SobicK043500 Sobic007G070700 Sobic007G070700 Sobic007G108000--Sobic007G070700 Sobic001G112250 Sobic001G112250 Sobic007G108000--Sobic001G112250 Sobic009G001600 Sobic009G001600 Sobic007G108000--Sobic009G001600 Sobic001G253501 Sobic001G253501 Sobic007G108000--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic007G108000--Sobic009G245750 Sobic002G211700 Sobic002G211700 Sobic007G108000--Sobic002G211700 Sobic002G077600 Sobic002G077600 Sobic007G108000--Sobic002G077600 Sobic008G103066 Sobic008G103066 Sobic007G108000--Sobic008G103066 Sobic005G003001--Sobic007G108000 Sobic005G003001--Sobic008G154400 Sobic003G024700 Sobic003G024700 Sobic005G003001--Sobic003G024700 Sobic005G003001--SobicK043500 Sobic010G219300 Sobic010G219300 Sobic005G003001--Sobic010G219300 Sobic010G148600 Sobic010G148600 Sobic005G003001--Sobic010G148600 Sobic001G249233 Sobic001G249233 Sobic005G003001--Sobic001G249233 Sobic005G174900 Sobic005G174900 Sobic005G003001--Sobic005G174900 Sobic005G140400 Sobic005G140400 Sobic005G003001--Sobic005G140400 Sobic008G161601 Sobic008G161601 Sobic006G054400--Sobic008G161601 Sobic009G231500 Sobic009G231500 Sobic006G054400--Sobic009G231500 Sobic006G132300 Sobic006G132300 Sobic006G054400--Sobic006G132300 Sobic002G370300 Sobic002G370300 Sobic006G054400--Sobic002G370300 Sobic003G101100 Sobic003G101100 Sobic006G054400--Sobic003G101100 Sobic006G054400--Sobic001G203100 Sobic006G054400--Sobic008G087100 Sobic010G044600 Sobic010G044600 Sobic006G054400--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic006G054400--Sobic010G237100 Sobic001G297800 Sobic001G297800 Sobic008G176600--Sobic001G297800 Sobic009G116500 Sobic009G116500 Sobic008G176600--Sobic009G116500 Sobic004G085100 Sobic004G085100 Sobic008G176600--Sobic004G085100 Sobic002G417900 Sobic002G417900 Sobic008G176600--Sobic002G417900 Sobic001G362900 Sobic001G362900 Sobic008G176600--Sobic001G362900 Sobic002G028100 Sobic002G028100 Sobic008G176600--Sobic002G028100 Sobic007G034900 Sobic007G034900 Sobic008G176600--Sobic007G034900 Sobic002G089400 Sobic002G089400 Sobic008G176600--Sobic002G089400 Sobic002G367600 Sobic002G367600 Sobic008G176600--Sobic002G367600 Sobic001G203100--Sobic001G166500 Sobic003G342000 Sobic003G342000 Sobic001G203100--Sobic003G342000 Sobic001G203100--Sobic009G231500 Sobic001G203100--Sobic010G274300 Sobic001G203100--Sobic003G438700 Sobic001G203100--Sobic008G154400 Sobic004G105300 Sobic004G105300 Sobic001G203100--Sobic004G105300 Sobic007G036600 Sobic007G036600 Sobic001G203100--Sobic007G036600 Sobic001G203100--Sobic003G101100 Sobic008G087100--Sobic003G101100 Sobic008G087100--Sobic002G370300 Sobic002G362400 Sobic002G362400 Sobic008G087100--Sobic002G362400 Sobic008G087100--Sobic010G044600 Sobic003G226000 Sobic003G226000 Sobic008G087100--Sobic003G226000 Sobic005G110000 Sobic005G110000 Sobic008G087100--Sobic005G110000 Sobic005G199300 Sobic005G199300 Sobic008G087100--Sobic005G199300 Sobic008G087100--Sobic010G237100 Sobic003G213300 Sobic003G213300 Sobic008G087100--Sobic003G213300
Octagon: transcription factors


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