Gene annotation
Transcriptome id Sobic.001G511800.1
Synonym Sb01g047733
Functional annotation expressed protein
UniProt A0A1B6QQN0
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g20310.4 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G188400 expressed protein -
2 Sobic.008G176200 - -
3 Sobic.006G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.004G041700 expressed protein -
5 Sobic.001G320300 HOTHEAD precursor, putative, expressed -
6 Sobic.001G215000 stilbene synthase, putative, expressed -
7 Sobic.005G054800 glyoxal oxidase-related, putative, expressed -
8 Sobic.005G010600 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
10 Sobic.007G153100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659906)@expressed protein -
11 Sobic.005G055400 amidase family protein, putative, expressed -
12 Sobic.009G153900 DUF623 domain containing protein, expressed -
13 Sobic.002G165500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
16 Sobic.006G187300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.007G107200 ankyrin repeat family protein, putative, expressed -
18 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
20 Sobic.002G173300 BURP domain containing protein, expressed -


Gene co-expression network
sample Sobic001G511800 Sobic001G511800 Sobic007G188400 Sobic007G188400 Sobic001G511800--Sobic007G188400 Sobic008G176200 Sobic008G176200 Sobic001G511800--Sobic008G176200 Sobic006G097100 Sobic006G097100 Sobic001G511800--Sobic006G097100 Sobic004G041700 Sobic004G041700 Sobic001G511800--Sobic004G041700 Sobic001G320300 Sobic001G320300 Sobic001G511800--Sobic001G320300 Sobic001G215000 Sobic001G215000 Sobic001G511800--Sobic001G215000 Sobic005G054800 Sobic005G054800 Sobic001G511800--Sobic005G054800 Sobic005G010600 Sobic005G010600 Sobic001G511800--Sobic005G010600 Sobic006G137000 Sobic006G137000 Sobic001G511800--Sobic006G137000 Sobic007G188400--Sobic001G511800 Sobic007G188400--Sobic004G041700 Sobic007G188400--Sobic006G097100 Sobic007G188400--Sobic008G176200 Sobic007G188400--Sobic005G054800 Sobic007G188400--Sobic001G320300 Sobic007G188400--Sobic001G215000 Sobic007G188400--Sobic005G010600 Sobic007G188400--Sobic006G137000 Sobic008G176200--Sobic001G511800 Sobic008G176200--Sobic001G320300 Sobic008G176200--Sobic001G215000 Sobic008G176200--Sobic006G097100 Sobic008G176200--Sobic007G188400 Sobic008G176200--Sobic004G041700 Sobic007G153100 Sobic007G153100 Sobic008G176200--Sobic007G153100 Sobic008G159601 Sobic008G159601 Sobic008G176200--Sobic008G159601 Sobic009G153900 Sobic009G153900 Sobic008G176200--Sobic009G153900 Sobic006G097100--Sobic001G320300 Sobic006G187300 Sobic006G187300 Sobic006G097100--Sobic006G187300 Sobic006G097100--Sobic001G215000 Sobic006G097100--Sobic001G511800 Sobic006G097100--Sobic008G176200 Sobic006G097100--Sobic004G041700 Sobic006G097100--Sobic005G054800 Sobic006G097100--Sobic005G010600 Sobic003G004900 Sobic003G004900 Sobic006G097100--Sobic003G004900 Sobic004G041700--Sobic005G054800 Sobic004G041700--Sobic006G137000 Sobic007G029900 Sobic007G029900 Sobic004G041700--Sobic007G029900 Sobic002G165500 Sobic002G165500 Sobic004G041700--Sobic002G165500 Sobic004G041700--Sobic005G010600 Sobic007G180700 Sobic007G180700 Sobic004G041700--Sobic007G180700 Sobic006G098300 Sobic006G098300 Sobic004G041700--Sobic006G098300 Sobic006G267400 Sobic006G267400 Sobic004G041700--Sobic006G267400 Sobic004G041700--Sobic003G004900 Sobic001G320300--Sobic006G097100 Sobic001G320300--Sobic006G187300 Sobic001G320300--Sobic006G137000 Sobic001G320300--Sobic003G004900 Sobic001G320300--Sobic001G215000 Sobic001G320300--Sobic005G010600 Sobic001G320300--Sobic005G054800 Sobic001G320300--Sobic007G153100 Sobic001G320300--Sobic004G041700 Sobic001G215000--Sobic006G187300 Sobic001G215000--Sobic001G320300 Sobic001G215000--Sobic006G097100 Sobic001G215000--Sobic006G137000 Sobic006G165300 Sobic006G165300 Sobic001G215000--Sobic006G165300 Sobic001G215000--Sobic008G176200 Sobic001G215000--Sobic005G010600 Sobic001G215000--Sobic003G004900 Sobic001G215000--Sobic004G041700 Sobic005G054800--Sobic006G137000 Sobic005G054800--Sobic007G180700 Sobic005G054800--Sobic006G098300 Sobic005G054800--Sobic007G029900 Sobic005G054800--Sobic002G165500 Sobic005G054800--Sobic006G267400 Sobic005G054800--Sobic005G010600 Sobic005G054800--Sobic003G004900 Sobic002G173300 Sobic002G173300 Sobic005G054800--Sobic002G173300 Sobic005G010600--Sobic002G165500 Sobic005G010600--Sobic005G054800 Sobic005G010600--Sobic006G137000 Sobic005G010600--Sobic003G004900 Sobic005G010600--Sobic006G267400 Sobic005G010600--Sobic007G180700 Sobic005G010600--Sobic006G098300 Sobic005G010600--Sobic002G173300 Sobic007G000600 Sobic007G000600 Sobic005G010600--Sobic007G000600 Sobic006G137000--Sobic006G267400 Sobic006G137000--Sobic003G004900 Sobic006G137000--Sobic005G054800 Sobic001G102600 Sobic001G102600 Sobic006G137000--Sobic001G102600 Sobic006G137000--Sobic007G180700 Sobic006G137000--Sobic006G098300 Sobic010G189366 Sobic010G189366 Sobic006G137000--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic006G137000--Sobic004G349150 Sobic006G137000--Sobic002G173300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.