Gene annotation
Transcriptome id Sobic.005G010600.1,Sobic.005G010600.2
Synonym Sb05g000960
Functional annotation LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Y350
Pfam -
Panther DB PTHR33044 PTHR33044:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43720 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os11g02165.1 : LTPL57 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G022430.3 , HORVU4Hr1G022430.2 , HORVU4Hr1G022430.1 , HORVU4Hr1G022430.5 , HORVU4Hr1G022430.4 , HORVU5Hr1G046870.1 , HORVU5Hr1G046870.2 , HORVU5Hr1G046870.3 , HORVU5Hr1G046870.4
Wheat TraesCS5A02G148300 , TraesCS5D02G144500 , TraesCS4D02G118000 , TraesCS4B02G119700 , TraesCS5B02G146800 , TraesCS4A02G195500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G165500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.005G054800 glyoxal oxidase-related, putative, expressed -
3 Sobic.006G137000 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
4 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
6 Sobic.007G180700 LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
8 Sobic.002G173300 BURP domain containing protein, expressed -
9 Sobic.007G000600 CRP2 - Cysteine-rich family protein precursor, expressed -
10 Sobic.001G102600 regulatory protein, putative, expressed -
11 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.001G366000 LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.004G349150 - -
16 Sobic.009G074900 expressed protein -
17 Sobic.003G016000 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.010G189366 - K01674: carbonic anhydrase
19 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
20 Sobic.006G006900 expressed protein -


Gene co-expression network
sample Sobic005G010600 Sobic005G010600 Sobic002G165500 Sobic002G165500 Sobic005G010600--Sobic002G165500 Sobic005G054800 Sobic005G054800 Sobic005G010600--Sobic005G054800 Sobic006G137000 Sobic006G137000 Sobic005G010600--Sobic006G137000 Sobic003G004900 Sobic003G004900 Sobic005G010600--Sobic003G004900 Sobic006G267400 Sobic006G267400 Sobic005G010600--Sobic006G267400 Sobic007G180700 Sobic007G180700 Sobic005G010600--Sobic007G180700 Sobic006G098300 Sobic006G098300 Sobic005G010600--Sobic006G098300 Sobic002G173300 Sobic002G173300 Sobic005G010600--Sobic002G173300 Sobic007G000600 Sobic007G000600 Sobic005G010600--Sobic007G000600 Sobic001G366000 Sobic001G366000 Sobic002G165500--Sobic001G366000 Sobic002G165500--Sobic007G180700 Sobic002G165500--Sobic007G000600 Sobic002G165500--Sobic006G098300 Sobic007G029900 Sobic007G029900 Sobic002G165500--Sobic007G029900 Sobic005G200700 Sobic005G200700 Sobic002G165500--Sobic005G200700 Sobic002G165500--Sobic006G267400 Sobic002G399600 Sobic002G399600 Sobic002G165500--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic002G165500--Sobic002G270400 Sobic005G054800--Sobic006G137000 Sobic005G054800--Sobic007G180700 Sobic005G054800--Sobic006G098300 Sobic005G054800--Sobic007G029900 Sobic005G054800--Sobic002G165500 Sobic005G054800--Sobic006G267400 Sobic005G054800--Sobic005G010600 Sobic005G054800--Sobic003G004900 Sobic005G054800--Sobic002G173300 Sobic006G137000--Sobic006G267400 Sobic006G137000--Sobic003G004900 Sobic006G137000--Sobic005G054800 Sobic001G102600 Sobic001G102600 Sobic006G137000--Sobic001G102600 Sobic006G137000--Sobic007G180700 Sobic006G137000--Sobic006G098300 Sobic010G189366 Sobic010G189366 Sobic006G137000--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic006G137000--Sobic004G349150 Sobic006G137000--Sobic002G173300 Sobic003G004900--Sobic007G180700 Sobic003G004900--Sobic006G267400 Sobic003G004900--Sobic001G102600 Sobic003G004900--Sobic010G189366 Sobic003G004900--Sobic002G173300 Sobic003G004900--Sobic004G349150 Sobic004G001700 Sobic004G001700 Sobic003G004900--Sobic004G001700 Sobic003G004900--Sobic006G098300 Sobic003G004900--Sobic006G137000 Sobic006G267400--Sobic006G098300 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic006G267400--Sobic004G349150 Sobic006G267400--Sobic002G399600 Sobic010G187400 Sobic010G187400 Sobic006G267400--Sobic010G187400 Sobic006G267400--Sobic004G001700 Sobic006G006900 Sobic006G006900 Sobic006G267400--Sobic006G006900 Sobic008G032400 Sobic008G032400 Sobic006G267400--Sobic008G032400 Sobic007G180700--Sobic006G267400 Sobic007G180700--Sobic006G098300 Sobic007G180700--Sobic003G004900 Sobic007G180700--Sobic002G270400 Sobic007G180700--Sobic002G399600 Sobic007G180700--Sobic004G001700 Sobic007G180700--Sobic002G173300 Sobic007G180700--Sobic010G187400 Sobic007G107500 Sobic007G107500 Sobic007G180700--Sobic007G107500 Sobic006G098300--Sobic002G270400 Sobic006G098300--Sobic006G006900 Sobic007G098600 Sobic007G098600 Sobic006G098300--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic006G098300--Sobic001G133200 Sobic002G173300--Sobic004G001700 Sobic002G173300--Sobic007G180700 Sobic002G173300--Sobic006G267400 Sobic006G006800 Sobic006G006800 Sobic002G173300--Sobic006G006800 Sobic002G173300--Sobic006G098300 Sobic002G173300--Sobic002G270400 Sobic002G173300--Sobic004G349150 Sobic009G074900 Sobic009G074900 Sobic002G173300--Sobic009G074900 Sobic003G088200 Sobic003G088200 Sobic002G173300--Sobic003G088200 Sobic007G000600--Sobic008G032400 Sobic007G000600--Sobic007G098600 Sobic007G000600--Sobic001G133200
Octagon: transcription factors


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