Gene annotation
Transcriptome id Sobic.002G045000.1
Synonym FAD2, Sb02g003840
Functional annotation fatty acid desaturase, putative, expressed
UniProt C5XAB6
Pfam PF11960 PF00487
Panther DB PTHR32100 PTHR32100:SF13
NCBI CDD -
KEGG Orthology K10256; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)
Gene Ontology GO:0016717; oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G12120 : fatty acid desaturase 2
RAP-DB (Rice) LOC_Os02g48560.1 : fatty acid desaturase, putative, expressed
MaizeGDB (Corn) Zm00025a021811 , Zm00025a045092 , Zm00025a054239 , Zm00025a054240 , Zm00025a032528
Brachypodium KQK01022 , KQK01023 , KQK01024 , KQK01025 , KQK01026
Barley HORVU6Hr1G070540.1 , HORVU6Hr1G070550.1 , HORVU6Hr1G070550.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.007G090442 - -
3 Sobic.002G274100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.007G062700 zinc finger family protein, putative, expressed -
5 Sobic.008G087100 DNA-binding storekeeper protein-related, putative, expressed -
6 Sobic.001G381250 - -
7 Sobic.001G381250 - -
8 Sobic.001G381250 - -
9 Sobic.001G381250 - -
10 Sobic.001G381250 - -
11 Sobic.001G381250 - -
12 Sobic.001G381250 - -
13 Sobic.001G381250 - -
14 Sobic.001G381250 - -
15 Sobic.001G381250 - -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic002G045000 Sobic002G045000 Sobic002G044100 Sobic002G044100 Sobic002G045000--Sobic002G044100 Sobic007G090442 Sobic007G090442 Sobic002G045000--Sobic007G090442 Sobic002G274100 Sobic002G274100 Sobic002G045000--Sobic002G274100 Sobic007G062700 Sobic007G062700 Sobic002G045000--Sobic007G062700 Sobic008G087100 Sobic008G087100 Sobic002G045000--Sobic008G087100 Sobic001G381250 Sobic001G381250 Sobic002G045000--Sobic001G381250 Sobic006G221700 Sobic006G221700 Sobic002G044100--Sobic006G221700 Sobic003G002501 Sobic003G002501 Sobic002G044100--Sobic003G002501 Sobic002G044100--Sobic002G045000 Sobic002G044100--Sobic007G062700 Sobic010G066500 Sobic010G066500 Sobic002G044100--Sobic010G066500 Sobic006G151001 Sobic006G151001 Sobic002G044100--Sobic006G151001 Sobic003G062200 Sobic003G062200 Sobic002G044100--Sobic003G062200 Sobic006G096200 Sobic006G096200 Sobic002G044100--Sobic006G096200 Sobic010G237100 Sobic010G237100 Sobic002G044100--Sobic010G237100 Sobic009G041100 Sobic009G041100 Sobic007G090442--Sobic009G041100 Sobic005G110000 Sobic005G110000 Sobic007G090442--Sobic005G110000 Sobic002G362400 Sobic002G362400 Sobic007G090442--Sobic002G362400 Sobic005G087666 Sobic005G087666 Sobic007G090442--Sobic005G087666 Sobic007G090442--Sobic010G237100 Sobic010G044600 Sobic010G044600 Sobic007G090442--Sobic010G044600 Sobic009G010000 Sobic009G010000 Sobic007G090442--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic007G090442--Sobic003G392500 Sobic005G199300 Sobic005G199300 Sobic007G090442--Sobic005G199300 Sobic006G244500 Sobic006G244500 Sobic002G274100--Sobic006G244500 Sobic010G253100 Sobic010G253100 Sobic002G274100--Sobic010G253100 Sobic002G274100--Sobic003G062200 Sobic004G028800 Sobic004G028800 Sobic002G274100--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic002G274100--Sobic001G488200 Sobic009G009800 Sobic009G009800 Sobic002G274100--Sobic009G009800 Sobic006G066600 Sobic006G066600 Sobic002G274100--Sobic006G066600 Sobic002G274100--Sobic006G151001 Sobic002G400400 Sobic002G400400 Sobic002G274100--Sobic002G400400 Sobic005G140300 Sobic005G140300 Sobic007G062700--Sobic005G140300 Sobic006G034275 Sobic006G034275 Sobic007G062700--Sobic006G034275 Sobic002G143700 Sobic002G143700 Sobic007G062700--Sobic002G143700 Sobic010G153800 Sobic010G153800 Sobic007G062700--Sobic010G153800 Sobic005G199101 Sobic005G199101 Sobic007G062700--Sobic005G199101 Sobic005G176500 Sobic005G176500 Sobic007G062700--Sobic005G176500 Sobic005G225000 Sobic005G225000 Sobic007G062700--Sobic005G225000 Sobic010G142300 Sobic010G142300 Sobic007G062700--Sobic010G142300 Sobic005G187100 Sobic005G187100 Sobic007G062700--Sobic005G187100 Sobic003G101100 Sobic003G101100 Sobic008G087100--Sobic003G101100 Sobic002G370300 Sobic002G370300 Sobic008G087100--Sobic002G370300 Sobic008G087100--Sobic002G362400 Sobic008G087100--Sobic010G044600 Sobic003G226000 Sobic003G226000 Sobic008G087100--Sobic003G226000 Sobic008G087100--Sobic005G110000 Sobic008G087100--Sobic005G199300 Sobic008G087100--Sobic010G237100 Sobic003G213300 Sobic003G213300 Sobic008G087100--Sobic003G213300 Sobic001G381250--Sobic001G381250
Octagon: transcription factors


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