Gene annotation
Transcriptome id Sobic.002G274100.1
Synonym Sb02g030770
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QDQ7
Pfam PF09791
Panther DB PTHR21193 PTHR21193:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17280 : -
RAP-DB (Rice) LOC_Os09g36120.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G274100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G244500 nuclease PA3, putative, expressed -
2 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
3 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
4 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
6 Sobic.009G009800 expressed protein -
7 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
8 Sobic.006G151001 - -
9 Sobic.002G400400 choline transporter-related, putative, expressed -
10 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
11 Sobic.002G045000 fatty acid desaturase, putative, expressed K10256: omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)
12 Sobic.003G000500 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
13 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
15 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1
16 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -
17 Sobic.001G267701 - -
18 Sobic.007G090442 - -
19 Sobic.005G158901 - -
20 Sobic.007G034600 U box protein 8, putative, expressed -


Gene co-expression network
sample Sobic002G274100 Sobic002G274100 Sobic006G244500 Sobic006G244500 Sobic002G274100--Sobic006G244500 Sobic010G253100 Sobic010G253100 Sobic002G274100--Sobic010G253100 Sobic003G062200 Sobic003G062200 Sobic002G274100--Sobic003G062200 Sobic004G028800 Sobic004G028800 Sobic002G274100--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic002G274100--Sobic001G488200 Sobic009G009800 Sobic009G009800 Sobic002G274100--Sobic009G009800 Sobic006G066600 Sobic006G066600 Sobic002G274100--Sobic006G066600 Sobic006G151001 Sobic006G151001 Sobic002G274100--Sobic006G151001 Sobic002G400400 Sobic002G400400 Sobic002G274100--Sobic002G400400 Sobic006G244500--Sobic009G009800 Sobic006G244500--Sobic003G062200 Sobic003G376000 Sobic003G376000 Sobic006G244500--Sobic003G376000 Sobic005G158901 Sobic005G158901 Sobic006G244500--Sobic005G158901 Sobic006G244500--Sobic006G151001 Sobic008G037000 Sobic008G037000 Sobic006G244500--Sobic008G037000 Sobic006G096200 Sobic006G096200 Sobic006G244500--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic006G244500--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic006G244500--Sobic001G277800 Sobic002G359900 Sobic002G359900 Sobic010G253100--Sobic002G359900 Sobic001G038100 Sobic001G038100 Sobic010G253100--Sobic001G038100 Sobic006G120800 Sobic006G120800 Sobic010G253100--Sobic006G120800 Sobic006G261100 Sobic006G261100 Sobic010G253100--Sobic006G261100 Sobic001G458200 Sobic001G458200 Sobic010G253100--Sobic001G458200 Sobic002G204000 Sobic002G204000 Sobic010G253100--Sobic002G204000 Sobic002G276900 Sobic002G276900 Sobic010G253100--Sobic002G276900 Sobic002G403200 Sobic002G403200 Sobic010G253100--Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic010G253100--Sobic003G192000 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G062200--Sobic003G376000 Sobic003G062200--Sobic008G037000 Sobic003G062200--Sobic006G151001 Sobic003G062200--Sobic006G096200 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic009G041100 Sobic009G041100 Sobic003G062200--Sobic009G041100 Sobic004G028800--Sobic006G244500 Sobic004G028800--Sobic001G488200 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic004G028800--Sobic003G062200 Sobic004G345100 Sobic004G345100 Sobic004G028800--Sobic004G345100 Sobic004G028800--Sobic009G009800 Sobic004G028800--Sobic002G359900 Sobic004G028800--Sobic006G066600 Sobic001G488200--Sobic006G244500 Sobic001G488200--Sobic006G151001 Sobic001G488200--Sobic004G028800 Sobic001G488200--Sobic009G009800 Sobic001G488200--Sobic003G062200 Sobic006G206500 Sobic006G206500 Sobic001G488200--Sobic006G206500 Sobic001G488200--Sobic005G158901 Sobic003G421900 Sobic003G421900 Sobic001G488200--Sobic003G421900 Sobic001G488200--Sobic006G066600 Sobic009G009800--Sobic006G244500 Sobic009G009800--Sobic010G031600 Sobic009G009800--Sobic003G376000 Sobic009G009800--Sobic001G277800 Sobic009G009800--Sobic010G136300 Sobic009G009800--Sobic005G158901 Sobic009G009800--Sobic008G037000 Sobic007G049400 Sobic007G049400 Sobic009G009800--Sobic007G049400 Sobic005G112066 Sobic005G112066 Sobic009G009800--Sobic005G112066 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic004G067900 Sobic004G067900 Sobic006G066600--Sobic004G067900 Sobic004G102900 Sobic004G102900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic006G066600--Sobic004G028800 Sobic006G066600--Sobic001G488200 Sobic006G066600--Sobic004G155300 Sobic002G308400 Sobic002G308400 Sobic006G066600--Sobic002G308400 Sobic006G151001--Sobic009G041100 Sobic006G151001--Sobic003G376000 Sobic006G151001--Sobic008G037000 Sobic006G151001--Sobic003G062200 Sobic006G151001--Sobic006G096200 Sobic009G169650 Sobic009G169650 Sobic006G151001--Sobic009G169650 Sobic006G151001--Sobic006G244500 Sobic006G151001--Sobic009G009800 Sobic010G044600 Sobic010G044600 Sobic006G151001--Sobic010G044600 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G103700 Sobic002G103700 Sobic002G400400--Sobic002G103700 Sobic003G436500 Sobic003G436500 Sobic002G400400--Sobic003G436500 Sobic008G160500 Sobic008G160500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic003G159500 Sobic003G159500 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500
Octagon: transcription factors


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