Gene annotation
Transcriptome id Sobic.002G046500.1
Synonym GA20OX2, AT2353, Sb02g003940, ATGA20OX2
Functional annotation gibberellin 20 oxidase 1-B, putative, expressed
UniProt C5XAC5
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF118
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G51810 : gibberellin 20 oxidase 2
RAP-DB (Rice) LOC_Os07g07420.1 : gibberellin 20 oxidase 1-B, putative, expressed
MaizeGDB (Corn) Zm00025a016102 , Zm00025a040653
Brachypodium KQK00433 , KQK23270 , KQK20711 , KQK20710 , KQK12006 , KQJ91631
Barley HORVU4Hr1G089480.1 , HORVU3Hr1G093370.1 , HORVU7Hr1G060070.10 , HORVU7Hr1G060070.11 , HORVU7Hr1G060070.12 , HORVU7Hr1G060070.13 , HORVU7Hr1G118760.2 , HORVU4Hr1G072540.2 , HORVU7Hr1G118760.1 , HORVU4Hr1G072540.3 , HORVU7Hr1G061380.1 , HORVU4Hr1G072540.4 , HORVU4Hr1G072540.5 , HORVU0Hr1G029200.2 , HORVU7Hr1G019530.4 , HORVU7Hr1G019530.3 , HORVU7Hr1G019530.2 , HORVU7Hr1G019530.1 , HORVU7Hr1G060070.6 , HORVU7Hr1G060070.7 , HORVU7Hr1G060070.5 , HORVU7Hr1G060070.3 , HORVU7Hr1G060070.1 , HORVU7Hr1G060070.8 , HORVU7Hr1G060070.9
Wheat TraesCS7D02G279500 , TraesCS6A02G033300 , TraesCS7B02G180300 , TraesCS7A02G280900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G090900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
2 Sobic.001G045300 ubiquitin family protein, putative, expressed -
3 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.002G084100 - -
5 Sobic.003G245101 - -
6 Sobic.004G162800 - -
7 Sobic.001G358101 - -
8 Sobic.002G289601 - -
9 Sobic.005G014600 OsMan09 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
10 Sobic.009G113300 - -
11 Sobic.009G159800 - -
12 Sobic.010G081500 - -
13 Sobic.003G190701 - -
14 Sobic.001G033701 - -
15 Sobic.008G008701 - -
16 Sobic.001G234700 AP2 domain containing protein, expressed -
17 Sobic.001G234700 AP2 domain containing protein, expressed -
18 Sobic.001G234700 AP2 domain containing protein, expressed -
19 Sobic.001G234700 AP2 domain containing protein, expressed -
20 Sobic.001G234700 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G046500 Sobic002G046500 Sobic004G090900 Sobic004G090900 Sobic002G046500--Sobic004G090900 Sobic001G045300 Sobic001G045300 Sobic002G046500--Sobic001G045300 Sobic007G027400 Sobic007G027400 Sobic002G046500--Sobic007G027400 Sobic002G084100 Sobic002G084100 Sobic002G046500--Sobic002G084100 Sobic003G245101 Sobic003G245101 Sobic002G046500--Sobic003G245101 Sobic004G162800 Sobic004G162800 Sobic002G046500--Sobic004G162800 Sobic001G358101 Sobic001G358101 Sobic002G046500--Sobic001G358101 Sobic002G289601 Sobic002G289601 Sobic002G046500--Sobic002G289601 Sobic005G014600 Sobic005G014600 Sobic002G046500--Sobic005G014600 Sobic004G090900--Sobic002G046500 Sobic004G090900--Sobic001G045300 Sobic004G090900--Sobic007G027400 Sobic008G008701 Sobic008G008701 Sobic004G090900--Sobic008G008701 Sobic004G090900--Sobic002G084100 Sobic004G090900--Sobic005G014600 Sobic004G122700 Sobic004G122700 Sobic004G090900--Sobic004G122700 Sobic001G033701 Sobic001G033701 Sobic004G090900--Sobic001G033701 Sobic004G090900--Sobic003G245101 Sobic001G045300--Sobic007G027400 Sobic001G045300--Sobic002G046500 Sobic001G045300--Sobic004G090900 Sobic001G045300--Sobic001G358101 Sobic001G045300--Sobic004G162800 Sobic001G045300--Sobic003G245101 Sobic001G045300--Sobic002G084100 Sobic001G045300--Sobic008G008701 Sobic003G190701 Sobic003G190701 Sobic001G045300--Sobic003G190701 Sobic007G027400--Sobic001G045300 Sobic007G027400--Sobic002G046500 Sobic007G027400--Sobic001G358101 Sobic007G027400--Sobic004G090900 Sobic007G027400--Sobic004G162800 Sobic007G027400--Sobic003G245101 Sobic007G027400--Sobic002G084100 Sobic007G027400--Sobic003G190701 Sobic007G027400--Sobic008G008701 Sobic002G084100--Sobic003G245101 Sobic002G084100--Sobic002G289601 Sobic009G159800 Sobic009G159800 Sobic002G084100--Sobic009G159800 Sobic002G084100--Sobic004G162800 Sobic010G081500 Sobic010G081500 Sobic002G084100--Sobic010G081500 Sobic002G084100--Sobic002G046500 Sobic009G113300 Sobic009G113300 Sobic002G084100--Sobic009G113300 Sobic002G084100--Sobic001G358101 Sobic002G084100--Sobic005G014600 Sobic003G245101--Sobic002G084100 Sobic003G245101--Sobic004G162800 Sobic003G245101--Sobic009G159800 Sobic003G245101--Sobic002G289601 Sobic003G245101--Sobic001G358101 Sobic003G245101--Sobic010G081500 Sobic003G245101--Sobic003G190701 Sobic003G245101--Sobic002G046500 Sobic003G245101--Sobic009G113300 Sobic004G162800--Sobic003G245101 Sobic004G162800--Sobic001G358101 Sobic004G162800--Sobic003G190701 Sobic004G162800--Sobic002G084100 Sobic004G162800--Sobic009G159800 Sobic001G234700 Sobic001G234700 Sobic004G162800--Sobic001G234700 Sobic001G358101--Sobic004G162800 Sobic001G358101--Sobic003G190701 Sobic001G358101--Sobic003G245101 Sobic001G358101--Sobic001G234700 Sobic002G289601--Sobic010G081500 Sobic002G289601--Sobic009G113300 Sobic002G289601--Sobic002G084100 Sobic002G289601--Sobic009G159800 Sobic002G289601--Sobic003G245101 Sobic006G258200 Sobic006G258200 Sobic002G289601--Sobic006G258200 Sobic002G289601--Sobic005G014600 Sobic001G160300 Sobic001G160300 Sobic002G289601--Sobic001G160300 Sobic002G289601--Sobic004G162800 Sobic005G014600--Sobic002G289601 Sobic005G014600--Sobic009G113300 Sobic005G014600--Sobic002G084100 Sobic005G014600--Sobic010G081500 Sobic005G014600--Sobic002G046500 Sobic005G014600--Sobic003G245101 Sobic005G014600--Sobic004G090900 Sobic005G014600--Sobic009G159800 Sobic008G069901 Sobic008G069901 Sobic005G014600--Sobic008G069901
Octagon: transcription factors


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