Gene annotation
Transcriptome id Sobic.002G061100.1
Synonym
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1B6Q9I3
Pfam -
Panther DB PTHR35546 PTHR35546:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g35110.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G178200 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G019900 GTP-binding protein, putative, expressed -
3 Sobic.003G143401 - -
4 Sobic.006G149650 - -
5 Sobic.003G422100 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
6 Sobic.005G082950 - -
7 Sobic.003G072566 - -
8 Sobic.001G084200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.002G081000 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
10 Sobic.009G168700 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
11 Sobic.002G302400 SAM dependent carboxyl methyltransferase, putative, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G061100 Sobic002G061100 Sobic006G178200 Sobic006G178200 Sobic002G061100--Sobic006G178200 Sobic004G019900 Sobic004G019900 Sobic002G061100--Sobic004G019900 Sobic003G143401 Sobic003G143401 Sobic002G061100--Sobic003G143401 Sobic006G149650 Sobic006G149650 Sobic002G061100--Sobic006G149650 Sobic003G422100 Sobic003G422100 Sobic002G061100--Sobic003G422100 Sobic005G082950 Sobic005G082950 Sobic002G061100--Sobic005G082950 Sobic003G072566 Sobic003G072566 Sobic002G061100--Sobic003G072566 Sobic001G084200 Sobic001G084200 Sobic002G061100--Sobic001G084200 Sobic002G081000 Sobic002G081000 Sobic002G061100--Sobic002G081000 Sobic006G178200--Sobic005G082950 Sobic006G178200--Sobic004G019900 Sobic002G302400 Sobic002G302400 Sobic006G178200--Sobic002G302400 Sobic001G272300 Sobic001G272300 Sobic006G178200--Sobic001G272300 Sobic004G019900--Sobic006G178200 Sobic004G019900--Sobic005G082950 Sobic009G147100 Sobic009G147100 Sobic004G019900--Sobic009G147100 Sobic003G091100 Sobic003G091100 Sobic004G019900--Sobic003G091100 Sobic004G019900--Sobic002G302400 Sobic004G019900--Sobic001G272300 Sobic003G143401--Sobic003G422100 Sobic003G143401--Sobic002G081000 Sobic001G497750 Sobic001G497750 Sobic003G143401--Sobic001G497750 Sobic007G005800 Sobic007G005800 Sobic003G143401--Sobic007G005800 Sobic001G530650 Sobic001G530650 Sobic003G143401--Sobic001G530650 Sobic003G049100 Sobic003G049100 Sobic003G143401--Sobic003G049100 Sobic003G143401--Sobic001G272300 Sobic003G046900 Sobic003G046900 Sobic006G149650--Sobic003G046900 Sobic006G149650--Sobic006G178200 Sobic006G149650--Sobic005G082950 Sobic010G212900 Sobic010G212900 Sobic006G149650--Sobic010G212900 Sobic010G021600 Sobic010G021600 Sobic006G149650--Sobic010G021600 Sobic004G196000 Sobic004G196000 Sobic006G149650--Sobic004G196000 Sobic008G192200 Sobic008G192200 Sobic006G149650--Sobic008G192200 Sobic008G192100 Sobic008G192100 Sobic006G149650--Sobic008G192100 Sobic006G149650--Sobic001G272300 Sobic003G422100--Sobic003G143401 Sobic003G422100--Sobic003G046900 Sobic003G242600 Sobic003G242600 Sobic003G422100--Sobic003G242600 Sobic009G214700 Sobic009G214700 Sobic003G422100--Sobic009G214700 Sobic003G422100--Sobic010G212900 Sobic003G429101 Sobic003G429101 Sobic003G422100--Sobic003G429101 Sobic003G422100--Sobic004G196000 Sobic003G422100--Sobic002G081000 Sobic003G422100--Sobic008G192200 Sobic005G082950--Sobic001G272300 Sobic008G166000 Sobic008G166000 Sobic003G072566--Sobic008G166000 Sobic003G372950 Sobic003G372950 Sobic003G072566--Sobic003G372950 Sobic005G057600 Sobic005G057600 Sobic003G072566--Sobic005G057600 Sobic007G059800 Sobic007G059800 Sobic003G072566--Sobic007G059800 Sobic004G286450 Sobic004G286450 Sobic003G072566--Sobic004G286450 Sobic003G064000 Sobic003G064000 Sobic003G072566--Sobic003G064000 Sobic004G201200 Sobic004G201200 Sobic003G072566--Sobic004G201200 Sobic008G154200 Sobic008G154200 Sobic003G072566--Sobic008G154200 Sobic001G062200 Sobic001G062200 Sobic003G072566--Sobic001G062200 Sobic009G168700 Sobic009G168700 Sobic001G084200--Sobic009G168700 Sobic004G067850 Sobic004G067850 Sobic001G084200--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic001G084200--Sobic008G032850 Sobic001G084200--Sobic006G178200 Sobic001G084200--Sobic002G302400 Sobic001G084200--Sobic008G192100 Sobic001G084200--Sobic005G082950 Sobic004G048600 Sobic004G048600 Sobic001G084200--Sobic004G048600 Sobic001G084200--Sobic001G272300 Sobic002G081000--Sobic001G272300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.