Gene annotation
Transcriptome id Sobic.002G175000.1
Synonym SGP1, Sb02g022380, ATSGP1
Functional annotation ras-related protein, putative, expressed
UniProt C5XAH6
Pfam PF00071
Panther DB PTHR24073 PTHR24073:SF515
NCBI CDD -
KEGG Orthology K07976; Rab family, other
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT5G54840 : Ras-related small GTP-binding family protein
RAP-DB (Rice) LOC_Os07g33850.2 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a048237 , Zm00025a014811
Brachypodium KQK15961
Barley HORVU2Hr1G045810.8 , HORVU2Hr1G045810.9 , HORVU2Hr1G045810.2 , HORVU2Hr1G045810.3 , HORVU2Hr1G045810.4 , HORVU2Hr1G045810.5 , HORVU2Hr1G045810.6 , HORVU2Hr1G045810.7 , HORVU2Hr1G045810.12 , HORVU2Hr1G045810.13 , HORVU2Hr1G045810.10 , HORVU2Hr1G045810.11 , HORVU2Hr1G045810.16 , HORVU2Hr1G045810.14 , HORVU2Hr1G045810.15 , HORVU6Hr1G079270.1
Wheat TraesCS2D02G226300 , TraesCS2A02G220600 , TraesCS2A02G220600 , TraesCS2B02G246100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371500 - -
2 Sobic.003G089400 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.007G181801 - -
4 Sobic.007G054300 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.008G048000 OsSAUR15 - Auxin-responsive SAUR gene family member -
6 Sobic.005G077666 - -
7 Sobic.003G095301 - -
8 Sobic.009G219601 - -
9 Sobic.008G146801 - -
10 Sobic.004G123801 - -
11 Sobic.002G120850 - -
12 Sobic.004G171350 - -
13 Sobic.001G328850 - -
14 Sobic.002G044200 cytochrome P450, putative, expressed -
15 Sobic.005G067000 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.004G121500 expansin precursor, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic002G175000 Sobic002G175000 Sobic001G371500 Sobic001G371500 Sobic002G175000--Sobic001G371500 Sobic003G089400 Sobic003G089400 Sobic002G175000--Sobic003G089400 Sobic007G181801 Sobic007G181801 Sobic002G175000--Sobic007G181801 Sobic007G054300 Sobic007G054300 Sobic002G175000--Sobic007G054300 Sobic008G048000 Sobic008G048000 Sobic002G175000--Sobic008G048000 Sobic005G077666 Sobic005G077666 Sobic002G175000--Sobic005G077666 Sobic003G095301 Sobic003G095301 Sobic002G175000--Sobic003G095301 Sobic009G219601 Sobic009G219601 Sobic002G175000--Sobic009G219601 Sobic008G146801 Sobic008G146801 Sobic002G175000--Sobic008G146801 Sobic001G371500--Sobic007G054300 Sobic001G371500--Sobic003G089400 Sobic001G018700 Sobic001G018700 Sobic001G371500--Sobic001G018700 Sobic003G089400--Sobic001G371500 Sobic003G089400--Sobic007G054300 Sobic003G089400--Sobic008G048000 Sobic002G120850 Sobic002G120850 Sobic003G089400--Sobic002G120850 Sobic002G044200 Sobic002G044200 Sobic003G089400--Sobic002G044200 Sobic005G067000 Sobic005G067000 Sobic003G089400--Sobic005G067000 Sobic003G405400 Sobic003G405400 Sobic003G089400--Sobic003G405400 Sobic001G539100 Sobic001G539100 Sobic003G089400--Sobic001G539100 Sobic003G089400--Sobic001G018700 Sobic007G181801--Sobic009G219601 Sobic007G181801--Sobic008G146801 Sobic004G123801 Sobic004G123801 Sobic007G181801--Sobic004G123801 Sobic004G246950 Sobic004G246950 Sobic007G181801--Sobic004G246950 Sobic007G181801--Sobic001G018700 Sobic007G054300--Sobic001G371500 Sobic007G054300--Sobic003G089400 Sobic007G054300--Sobic008G048000 Sobic007G054300--Sobic001G018700 Sobic008G048000--Sobic003G089400 Sobic008G048000--Sobic001G371500 Sobic008G048000--Sobic007G054300 Sobic008G048000--Sobic002G120850 Sobic003G258000 Sobic003G258000 Sobic008G048000--Sobic003G258000 Sobic008G048000--Sobic002G044200 Sobic008G048000--Sobic005G067000 Sobic003G094850 Sobic003G094850 Sobic008G048000--Sobic003G094850 Sobic005G102750 Sobic005G102750 Sobic008G048000--Sobic005G102750 Sobic005G077666--Sobic007G181801 Sobic005G077666--Sobic004G123801 Sobic005G077666--Sobic009G219601 Sobic010G090550 Sobic010G090550 Sobic005G077666--Sobic010G090550 Sobic001G338200 Sobic001G338200 Sobic005G077666--Sobic001G338200 Sobic005G077666--Sobic008G146801 Sobic001G211101 Sobic001G211101 Sobic005G077666--Sobic001G211101 Sobic005G077666--Sobic001G018700 Sobic003G095301--Sobic007G181801 Sobic009G196500 Sobic009G196500 Sobic003G095301--Sobic009G196500 Sobic003G095301--Sobic009G219601 Sobic003G095301--Sobic004G123801 Sobic003G095301--Sobic008G146801 Sobic005G193900 Sobic005G193900 Sobic003G095301--Sobic005G193900 Sobic003G384650 Sobic003G384650 Sobic003G095301--Sobic003G384650 Sobic001G030800 Sobic001G030800 Sobic003G095301--Sobic001G030800 Sobic003G095301--Sobic001G018700 Sobic009G219601--Sobic008G146801 Sobic010G158300 Sobic010G158300 Sobic009G219601--Sobic010G158300 Sobic002G218350 Sobic002G218350 Sobic009G219601--Sobic002G218350 Sobic009G219601--Sobic001G018700 Sobic008G146801--Sobic009G219601 Sobic007G151650 Sobic007G151650 Sobic008G146801--Sobic007G151650 Sobic008G146801--Sobic003G094850 Sobic008G146801--Sobic005G102750 Sobic003G066200 Sobic003G066200 Sobic008G146801--Sobic003G066200 Sobic008G146801--Sobic001G018700
Octagon: transcription factors


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