Gene annotation
Transcriptome id Sobic.002G253800.2,Sobic.002G253800.1,Sobic.002G253800.3
Synonym ACA9, Sb02g028935, ATACA9
Functional annotation "Ca ATPase, IIB type" (PubMedID : 22196357)
calcium-transporting ATPase, plasma membrane-type, putative, expressed
UniProt A0A1W0W5N4 , C5X4J6
Pfam PF00690 PF00702 PF00122 PF00689 PF00690 PF12515 PF00702 PF00122 PF00689
Panther DB PTHR24093 PTHR24093:SF359
NCBI CDD -
KEGG Orthology K01537; P-type Ca2+ transporter type 2C
Gene Ontology GO:0005516; calmodulin binding GO:0000166nucleotide binding GO:0000166nucleotide binding


Orthologs (automatic annotation)
TAIR AT3G21180 : autoinhibited Ca2+ -ATPase, isoform 8,autoinhibited Ca(2+)-ATPase 9
RAP-DB (Rice) LOC_Os04g51610.1 : calcium-transporting ATPase, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a005185 , Zm00025a047514 , Zm00025a047511
Brachypodium KQJ98964 , KQJ99033
Barley HORVU7Hr1G052560.5 , HORVU7Hr1G052560.4 , HORVU7Hr1G052560.7 , HORVU7Hr1G052560.6 , HORVU7Hr1G052560.1 , HORVU7Hr1G052560.3 , HORVU7Hr1G052560.2 , HORVU5Hr1G075050.1 , HORVU5Hr1G075050.2 , HORVU5Hr1G075050.3 , HORVU5Hr1G075050.4 , HORVU5Hr1G075050.5 , HORVU5Hr1G075050.6 , HORVU5Hr1G075050.7 , HORVU5Hr1G075050.9 , HORVU5Hr1G075050.28 , HORVU5Hr1G075050.18 , HORVU5Hr1G075050.19 , HORVU5Hr1G075050.12 , HORVU5Hr1G075050.13 , HORVU5Hr1G075050.10 , HORVU5Hr1G075050.11 , HORVU5Hr1G075050.16 , HORVU5Hr1G075050.17 , HORVU5Hr1G075050.14 , HORVU5Hr1G075050.15 , HORVU5Hr1G075050.20 , HORVU5Hr1G075050.27 , HORVU5Hr1G075050.26 , HORVU5Hr1G075050.29 , HORVU5Hr1G075050.23 , HORVU5Hr1G075050.22 , HORVU5Hr1G075050.21 , HORVU5Hr1G075050.25 , HORVU5Hr1G075050.24 , HORVU5Hr1G075050.30 , HORVU5Hr1G075050.31 , HORVU5Hr1G075050.32 , HORVU5Hr1G075050.33 , HORVU5Hr1G075050.34 , HORVU5Hr1G075050.35 , HORVU5Hr1G075050.36
Wheat TraesCS5B02G276500 , TraesCS5B02G276500 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5A02G276700 , TraesCS5D02G284100 , TraesCS5D02G284100 , TraesCS5D02G284100 , TraesCS5D02G284100 , TraesCS5D02G284100 , TraesCS5D02G284100 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G016700 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.002G123100 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
3 Sobic.010G005900 nodulin, putative, expressed -
4 Sobic.003G179700 beta-galactosidase precursor, putative, expressed -
5 Sobic.003G198048 - -
6 Sobic.002G007400 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.003G205700 THION18 - Plant thionin family protein precursor, expressed -
8 Sobic.006G251301 - -
9 Sobic.003G162500 expressed protein -
10 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
11 Sobic.003G071300 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
12 Sobic.008G189800 CHCH domain containing protein, expressed -
13 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.001G150300 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
15 Sobic.004G090700 - -
16 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
17 Sobic.008G138300 expressed protein -
18 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
19 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
20 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic002G253800 Sobic002G253800 Sobic002G016700 Sobic002G016700 Sobic002G253800--Sobic002G016700 Sobic002G123100 Sobic002G123100 Sobic002G253800--Sobic002G123100 Sobic010G005900 Sobic010G005900 Sobic002G253800--Sobic010G005900 Sobic003G179700 Sobic003G179700 Sobic002G253800--Sobic003G179700 Sobic003G198048 Sobic003G198048 Sobic002G253800--Sobic003G198048 Sobic002G007400 Sobic002G007400 Sobic002G253800--Sobic002G007400 Sobic003G205700 Sobic003G205700 Sobic002G253800--Sobic003G205700 Sobic006G251301 Sobic006G251301 Sobic002G253800--Sobic006G251301 Sobic003G162500 Sobic003G162500 Sobic002G253800--Sobic003G162500 Sobic003G090300 Sobic003G090300 Sobic002G016700--Sobic003G090300 Sobic002G016700--Sobic002G253800 Sobic005G138100 Sobic005G138100 Sobic002G016700--Sobic005G138100 Sobic002G016700--Sobic003G205700 Sobic005G175150 Sobic005G175150 Sobic002G016700--Sobic005G175150 Sobic004G090100 Sobic004G090100 Sobic002G016700--Sobic004G090100 Sobic010G124600 Sobic010G124600 Sobic002G016700--Sobic010G124600 Sobic008G137901 Sobic008G137901 Sobic002G016700--Sobic008G137901 Sobic002G016700--Sobic010G005900 Sobic001G150300 Sobic001G150300 Sobic002G123100--Sobic001G150300 Sobic004G354600 Sobic004G354600 Sobic002G123100--Sobic004G354600 Sobic007G167300 Sobic007G167300 Sobic002G123100--Sobic007G167300 Sobic001G401975 Sobic001G401975 Sobic002G123100--Sobic001G401975 Sobic001G394900 Sobic001G394900 Sobic002G123100--Sobic001G394900 Sobic003G101200 Sobic003G101200 Sobic002G123100--Sobic003G101200 Sobic003G331100 Sobic003G331100 Sobic002G123100--Sobic003G331100 Sobic001G359700 Sobic001G359700 Sobic002G123100--Sobic001G359700 Sobic001G324800 Sobic001G324800 Sobic002G123100--Sobic001G324800 Sobic002G305400 Sobic002G305400 Sobic010G005900--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic010G005900--Sobic009G087900 Sobic002G334400 Sobic002G334400 Sobic010G005900--Sobic002G334400 Sobic003G206100 Sobic003G206100 Sobic010G005900--Sobic003G206100 Sobic010G005900--Sobic006G251301 Sobic001G153800 Sobic001G153800 Sobic010G005900--Sobic001G153800 Sobic003G070200 Sobic003G070200 Sobic010G005900--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic010G005900--Sobic001G359100 Sobic008G189800 Sobic008G189800 Sobic010G005900--Sobic008G189800 Sobic007G073300 Sobic007G073300 Sobic003G179700--Sobic007G073300 Sobic002G129600 Sobic002G129600 Sobic003G179700--Sobic002G129600 Sobic003G206200 Sobic003G206200 Sobic003G179700--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic003G179700--Sobic004G159200 Sobic004G090700 Sobic004G090700 Sobic003G179700--Sobic004G090700 Sobic003G413400 Sobic003G413400 Sobic003G179700--Sobic003G413400 Sobic003G179700--Sobic003G162500 Sobic003G206300 Sobic003G206300 Sobic003G179700--Sobic003G206300 Sobic007G064600 Sobic007G064600 Sobic003G179700--Sobic007G064600 Sobic003G198016 Sobic003G198016 Sobic003G198048--Sobic003G198016 Sobic003G198048--Sobic010G124600 Sobic006G034200 Sobic006G034200 Sobic003G198048--Sobic006G034200 Sobic001G538000 Sobic001G538000 Sobic003G198048--Sobic001G538000 Sobic005G110538 Sobic005G110538 Sobic003G198048--Sobic005G110538 Sobic009G156400 Sobic009G156400 Sobic003G198048--Sobic009G156400 Sobic008G087300 Sobic008G087300 Sobic003G198048--Sobic008G087300 Sobic003G198048--Sobic003G179700 Sobic004G167000 Sobic004G167000 Sobic003G198048--Sobic004G167000 Sobic002G007400--Sobic003G179700 Sobic003G206000 Sobic003G206000 Sobic002G007400--Sobic003G206000 Sobic002G007400--Sobic007G073300 Sobic003G239400 Sobic003G239400 Sobic002G007400--Sobic003G239400 Sobic002G007400--Sobic007G064600 Sobic010G200000 Sobic010G200000 Sobic002G007400--Sobic010G200000 Sobic002G007400--Sobic003G206300 Sobic001G332050 Sobic001G332050 Sobic002G007400--Sobic001G332050 Sobic003G205700--Sobic003G413400 Sobic003G205700--Sobic004G159200 Sobic003G205700--Sobic003G206200 Sobic003G205700--Sobic004G090700 Sobic003G205700--Sobic002G129600 Sobic003G205700--Sobic008G189800 Sobic003G205700--Sobic003G206300 Sobic009G116300 Sobic009G116300 Sobic003G205700--Sobic009G116300 Sobic008G138300 Sobic008G138300 Sobic003G205700--Sobic008G138300 Sobic006G251301--Sobic003G206100 Sobic006G251301--Sobic008G189800 Sobic006G251301--Sobic003G162500 Sobic006G251301--Sobic004G090700 Sobic006G251301--Sobic003G206200 Sobic006G251301--Sobic004G159200 Sobic006G251301--Sobic003G413400 Sobic006G251301--Sobic007G073300 Sobic006G251301--Sobic002G129600 Sobic003G162500--Sobic004G090700 Sobic003G162500--Sobic008G189800 Sobic003G162500--Sobic003G206200 Sobic003G162500--Sobic004G159200 Sobic003G162500--Sobic003G413400 Sobic003G162500--Sobic006G251301 Sobic003G162500--Sobic003G206100 Sobic003G162500--Sobic008G138300 Sobic003G162500--Sobic002G129600
Octagon: transcription factors


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