Gene annotation
| Transcriptome id | Sobic.002G271500.1 |
|---|---|
| Synonym | |
| Functional annotation | - |
| UniProt | A0A1B6QDR0 |
| Pfam | - |
| Panther DB | - |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT2G15530 : RING/U-box superfamily protein |
|---|---|
| RAP-DB (Rice) | - |
| MaizeGDB (Corn) | Zm00025a013716 , Zm00025a013718 , Zm00025a013713 |
| Brachypodium | PNT63277 , PNT74899 |
| Barley | HORVU2Hr1G100670.1 , HORVU1Hr1G092970.1 , HORVU4Hr1G008140.1 , HORVU5Hr1G124640.1 , HORVU5Hr1G080970.1 , HORVU3Hr1G093540.1 , HORVU5Hr1G023050.1 |
| Wheat | - |
| Populus | PNT35089 |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G127800 | MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 2 | Sobic.007G168000 | chlorophyllase-2, chloroplast precursor, putative, expressed | K08099: chlorophyllase |
| 3 | Sobic.010G008466 | - | - |
| 4 | Sobic.001G261750 | - | - |
| 5 | Sobic.001G261750 | - | - |
| 6 | Sobic.001G261750 | - | - |
| 7 | Sobic.001G261750 | - | - |
| 8 | Sobic.001G261750 | - | - |
| 9 | Sobic.008G028566 | - | - |
| 10 | Sobic.004G143801 | - | - |
| 11 | Sobic.010G105250 | - | - |
| 12 | Sobic.009G069901 | - | - |
| 13 | Sobic.006G007300 | - | - |
| 14 | Sobic.009G070800 | HAD superfamily phosphatase, putative, expressed | - |
| 15 | Sobic.002G093600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed | - |
| 16 | Sobic.005G048250 | - | - |
| 17 | Sobic.001G494600 | expressed protein | - |
| 18 | Sobic.002G298400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed | K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase |
| 19 | Sobic.008G077800 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 20 | Sobic.002G391700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed | K00430: peroxidase |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
