Gene annotation
Transcriptome id Sobic.002G397300.1
Synonym
Functional annotation thiol protease SEN102 precursor, putative, expressed
UniProt A0A1B6QFW2
Pfam PF08246 PF00112
Panther DB PTHR12411
NCBI CDD KOG1542; Cysteine proteinase Cathepsin F
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G50260 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os09g39160.1 : thiol protease SEN102 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G397100 thiol protease SEN102 precursor, putative, expressed -
2 Sobic.006G026300 expressed protein -
3 Sobic.005G048100 - -
4 Sobic.002G153900 ZOS9-02 - C2H2 zinc finger protein, expressed -
5 Sobic.001G448750 - -
6 Sobic.002G384600 expressed protein -
7 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
8 Sobic.002G100100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G243700 - -
10 Sobic.008G139250 - -
11 Sobic.001G261464 - -
12 Sobic.002G026150 - -
13 Sobic.003G126750 - -
14 Sobic.004G358301 - -
15 Sobic.006G109600 - -
16 Sobic.005G031901 - -
17 Sobic.010G147300 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
18 Sobic.007G067800 - -
19 Sobic.002G269900 cytokinin-O-glucosyltransferase 2, putative, expressed -
20 Sobic.002G175700 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1


Gene co-expression network
sample Sobic002G397300 Sobic002G397300 Sobic002G397100 Sobic002G397100 Sobic002G397300--Sobic002G397100 Sobic006G026300 Sobic006G026300 Sobic002G397300--Sobic006G026300 Sobic005G048100 Sobic005G048100 Sobic002G397300--Sobic005G048100 Sobic002G153900 Sobic002G153900 Sobic002G397300--Sobic002G153900 Sobic001G448750 Sobic001G448750 Sobic002G397300--Sobic001G448750 Sobic002G384600 Sobic002G384600 Sobic002G397300--Sobic002G384600 Sobic004G358200 Sobic004G358200 Sobic002G397300--Sobic004G358200 Sobic002G100100 Sobic002G100100 Sobic002G397300--Sobic002G100100 Sobic004G243700 Sobic004G243700 Sobic002G397300--Sobic004G243700 Sobic002G397100--Sobic002G397300 Sobic002G397100--Sobic001G448750 Sobic002G397100--Sobic006G026300 Sobic002G397100--Sobic002G153900 Sobic002G397100--Sobic005G048100 Sobic002G397100--Sobic002G384600 Sobic002G397100--Sobic004G358200 Sobic006G147500 Sobic006G147500 Sobic002G397100--Sobic006G147500 Sobic002G397100--Sobic002G100100 Sobic006G026300--Sobic002G100100 Sobic001G261464 Sobic001G261464 Sobic006G026300--Sobic001G261464 Sobic006G026300--Sobic002G153900 Sobic006G026300--Sobic004G243700 Sobic005G031901 Sobic005G031901 Sobic006G026300--Sobic005G031901 Sobic006G026300--Sobic004G358200 Sobic003G126750 Sobic003G126750 Sobic006G026300--Sobic003G126750 Sobic006G109600 Sobic006G109600 Sobic006G026300--Sobic006G109600 Sobic010G147300 Sobic010G147300 Sobic006G026300--Sobic010G147300 Sobic005G048100--Sobic004G358200 Sobic005G048100--Sobic003G126750 Sobic005G048100--Sobic001G261464 Sobic008G139250 Sobic008G139250 Sobic005G048100--Sobic008G139250 Sobic002G026150 Sobic002G026150 Sobic005G048100--Sobic002G026150 Sobic005G048100--Sobic004G243700 Sobic005G048100--Sobic006G026300 Sobic005G048100--Sobic006G109600 Sobic005G048100--Sobic002G153900 Sobic002G153900--Sobic003G126750 Sobic002G153900--Sobic004G358200 Sobic002G153900--Sobic001G261464 Sobic002G153900--Sobic002G026150 Sobic002G153900--Sobic006G026300 Sobic002G153900--Sobic006G109600 Sobic002G153900--Sobic005G031901 Sobic004G358301 Sobic004G358301 Sobic002G153900--Sobic004G358301 Sobic002G153900--Sobic002G100100 Sobic001G448750--Sobic002G397100 Sobic001G448750--Sobic002G397300 Sobic005G218600 Sobic005G218600 Sobic001G448750--Sobic005G218600 Sobic001G343300 Sobic001G343300 Sobic001G448750--Sobic001G343300 Sobic005G183300 Sobic005G183300 Sobic001G448750--Sobic005G183300 Sobic001G379300 Sobic001G379300 Sobic001G448750--Sobic001G379300 Sobic007G009600 Sobic007G009600 Sobic001G448750--Sobic007G009600 Sobic002G397400 Sobic002G397400 Sobic001G448750--Sobic002G397400 Sobic001G336800 Sobic001G336800 Sobic001G448750--Sobic001G336800 Sobic002G384600--Sobic002G153900 Sobic002G384600--Sobic006G026300 Sobic002G384600--Sobic004G358301 Sobic002G384600--Sobic005G031901 Sobic002G384600--Sobic004G358200 Sobic002G384600--Sobic001G261464 Sobic002G384600--Sobic006G109600 Sobic002G384600--Sobic002G026150 Sobic002G384600--Sobic010G147300 Sobic004G358200--Sobic001G261464 Sobic004G358200--Sobic003G126750 Sobic004G358200--Sobic002G153900 Sobic004G358200--Sobic005G031901 Sobic004G358200--Sobic006G109600 Sobic004G358200--Sobic006G026300 Sobic004G358200--Sobic002G100100 Sobic004G358200--Sobic004G243700 Sobic004G358200--Sobic002G026150 Sobic002G100100--Sobic005G031901 Sobic002G100100--Sobic001G261464 Sobic002G100100--Sobic006G109600 Sobic002G100100--Sobic003G126750 Sobic002G100100--Sobic010G147300 Sobic002G100100--Sobic006G026300 Sobic002G100100--Sobic004G358301 Sobic002G100100--Sobic004G243700 Sobic002G100100--Sobic002G026150 Sobic004G243700--Sobic003G126750 Sobic004G243700--Sobic001G261464 Sobic004G243700--Sobic002G100100 Sobic004G243700--Sobic006G109600 Sobic004G243700--Sobic005G031901 Sobic004G243700--Sobic010G147300 Sobic004G243700--Sobic002G026150 Sobic004G243700--Sobic006G026300 Sobic004G243700--Sobic004G358200
Octagon: transcription factors


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