Gene annotation
Transcriptome id Sobic.003G057000.1
Synonym Sb03g004860, Nuclear Factor Y, SbNF-YB4
Functional annotation tentative name (PubMedID : 31536532)
S-locus-like receptor protein kinase, putative, expressed
UniProt C5XNJ6
Pfam PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF13
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34300 : lectin protein kinase family protein
RAP-DB (Rice) LOC_Os01g47840.1 : S-locus-like receptor protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G061450.5 , HORVU3Hr1G061450.4 , HORVU3Hr1G061450.3 , HORVU3Hr1G061450.2
Wheat TraesCS3A02G246200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G175100 carrier, putative, expressed -
2 Sobic.007G149950 - -
3 Sobic.007G038100 lectin-like receptor kinase, putative, expressed -
4 Sobic.002G375500 protein kinase domain containing protein, expressed -
5 Sobic.006G280250 - -
6 Sobic.007G175000 carrier, putative, expressed -
7 Sobic.010G033750 - -
8 Sobic.004G278800 - -
9 Sobic.001G422001 - -
10 Sobic.007G149500 expressed protein -
11 Sobic.004G231100 expressed protein -
12 Sobic.001G145550 - -
13 Sobic.001G187900 disease resistance protein, putative, expressed -
14 Sobic.002G046150 - -
15 Sobic.001G174100 GRAS family transcription factor containing protein, expressed -
16 Sobic.009G056950 - -
17 Sobic.008G075500 verticillium wilt disease resistance protein, putative, expressed -
18 Sobic.001G244650 - -
19 Sobic.006G215650 - -
20 Sobic.005G168200 -(PubMedID : 34525227)@expressed protein K17911: beta-carotene isomerase


Gene co-expression network
sample Sobic003G057000 Sobic003G057000 Sobic007G175100 Sobic007G175100 Sobic003G057000--Sobic007G175100 Sobic007G149950 Sobic007G149950 Sobic003G057000--Sobic007G149950 Sobic007G038100 Sobic007G038100 Sobic003G057000--Sobic007G038100 Sobic002G375500 Sobic002G375500 Sobic003G057000--Sobic002G375500 Sobic006G280250 Sobic006G280250 Sobic003G057000--Sobic006G280250 Sobic007G175000 Sobic007G175000 Sobic003G057000--Sobic007G175000 Sobic010G033750 Sobic010G033750 Sobic003G057000--Sobic010G033750 Sobic004G278800 Sobic004G278800 Sobic003G057000--Sobic004G278800 Sobic001G422001 Sobic001G422001 Sobic003G057000--Sobic001G422001 Sobic007G175100--Sobic002G375500 Sobic007G175100--Sobic007G175000 Sobic007G175100--Sobic007G038100 Sobic001G174200 Sobic001G174200 Sobic007G175100--Sobic001G174200 Sobic010G274700 Sobic010G274700 Sobic007G175100--Sobic010G274700 Sobic007G175100--Sobic003G057000 Sobic001G174100 Sobic001G174100 Sobic007G175100--Sobic001G174100 Sobic001G145550 Sobic001G145550 Sobic007G175100--Sobic001G145550 Sobic007G175100--Sobic001G422001 Sobic007G149950--Sobic007G175100 Sobic007G149950--Sobic007G175000 Sobic007G149950--Sobic003G057000 Sobic006G117800 Sobic006G117800 Sobic007G149950--Sobic006G117800 Sobic001G187900 Sobic001G187900 Sobic007G149950--Sobic001G187900 Sobic001G074601 Sobic001G074601 Sobic007G149950--Sobic001G074601 Sobic009G218450 Sobic009G218450 Sobic007G149950--Sobic009G218450 Sobic002G086900 Sobic002G086900 Sobic007G149950--Sobic002G086900 Sobic007G149950--Sobic007G038100 Sobic007G038100--Sobic002G375500 Sobic007G038100--Sobic007G175100 Sobic007G038100--Sobic007G175000 Sobic007G174500 Sobic007G174500 Sobic007G038100--Sobic007G174500 Sobic007G038100--Sobic001G145550 Sobic006G215650 Sobic006G215650 Sobic007G038100--Sobic006G215650 Sobic007G038100--Sobic001G174100 Sobic003G368550 Sobic003G368550 Sobic007G038100--Sobic003G368550 Sobic009G213150 Sobic009G213150 Sobic007G038100--Sobic009G213150 Sobic002G375500--Sobic007G175100 Sobic002G375500--Sobic007G038100 Sobic002G208500 Sobic002G208500 Sobic002G375500--Sobic002G208500 Sobic002G375500--Sobic007G174500 Sobic002G375500--Sobic010G274700 Sobic002G375500--Sobic001G145550 Sobic006G054200 Sobic006G054200 Sobic002G375500--Sobic006G054200 Sobic005G168200 Sobic005G168200 Sobic002G375500--Sobic005G168200 Sobic002G375500--Sobic001G174100 Sobic008G075500 Sobic008G075500 Sobic006G280250--Sobic008G075500 Sobic004G091300 Sobic004G091300 Sobic006G280250--Sobic004G091300 Sobic009G212500 Sobic009G212500 Sobic006G280250--Sobic009G212500 Sobic002G208900 Sobic002G208900 Sobic006G280250--Sobic002G208900 Sobic008G169500 Sobic008G169500 Sobic006G280250--Sobic008G169500 Sobic006G280250--Sobic006G215650 Sobic004G267650 Sobic004G267650 Sobic006G280250--Sobic004G267650 Sobic006G280250--Sobic003G057000 Sobic002G046150 Sobic002G046150 Sobic006G280250--Sobic002G046150 Sobic007G175000--Sobic007G175100 Sobic003G210500 Sobic003G210500 Sobic007G175000--Sobic003G210500 Sobic007G175000--Sobic007G038100 Sobic007G175000--Sobic001G174200 Sobic007G175000--Sobic002G375500 Sobic009G037500 Sobic009G037500 Sobic007G175000--Sobic009G037500 Sobic007G175000--Sobic001G145550 Sobic007G175000--Sobic007G149950 Sobic005G150700 Sobic005G150700 Sobic007G175000--Sobic005G150700 Sobic010G033750--Sobic004G278800 Sobic003G059450 Sobic003G059450 Sobic010G033750--Sobic003G059450 Sobic008G174200 Sobic008G174200 Sobic010G033750--Sobic008G174200 Sobic002G094000 Sobic002G094000 Sobic010G033750--Sobic002G094000 Sobic010G033750--Sobic001G422001 Sobic002G094100 Sobic002G094100 Sobic010G033750--Sobic002G094100 Sobic008G138850 Sobic008G138850 Sobic010G033750--Sobic008G138850 Sobic009G078401 Sobic009G078401 Sobic010G033750--Sobic009G078401 Sobic001G443400 Sobic001G443400 Sobic010G033750--Sobic001G443400 Sobic004G278800--Sobic002G094000 Sobic004G278800--Sobic009G078401 Sobic004G278800--Sobic010G033750 Sobic004G278800--Sobic002G094100 Sobic004G278800--Sobic001G422001 Sobic004G278800--Sobic008G138850 Sobic003G142500 Sobic003G142500 Sobic004G278800--Sobic003G142500 Sobic005G019300 Sobic005G019300 Sobic004G278800--Sobic005G019300 Sobic009G078300 Sobic009G078300 Sobic004G278800--Sobic009G078300 Sobic001G422001--Sobic001G145550 Sobic001G422001--Sobic004G278800 Sobic001G422001--Sobic009G037500 Sobic001G422001--Sobic010G033750 Sobic001G422001--Sobic002G094000 Sobic001G422001--Sobic009G078401 Sobic001G422001--Sobic005G168200 Sobic006G094900 Sobic006G094900 Sobic001G422001--Sobic006G094900 Sobic001G422001--Sobic009G078300
Octagon: transcription factors


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