Gene annotation
Transcriptome id Sobic.003G231400.1
Synonym laccase gene, Sb03g028920, LAC11, SbLAC5
Functional annotation lignin modification (PubMedID : 28529519)
laccase precursor protein, putative, expressed
UniProt C5XEH6
Pfam PF07732 PF07731 PF00394
Panther DB PTHR11709 PTHR11709:SF99
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology K05909; laccase
Gene Ontology GO:0005507; copper ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G03260 : laccase 11
RAP-DB (Rice) LOC_Os01g44330.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a026896
Brachypodium -
Barley -
Wheat TraesCS3A02G360600 , TraesCS3B02G393000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G260550 - -
2 Sobic.001G417100 - -
3 Sobic.001G028301 - -
4 Sobic.007G223150 - -
5 Sobic.002G253300 expressed protein -
6 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.005G083932 - -
11 Sobic.008G174400 OsFBX464 - F-box domain containing protein, expressed -
12 Sobic.002G191200 OsFBX55 - F-box domain containing protein, expressed -
13 Sobic.002G373500 OsFBX152 - F-box domain containing protein, expressed -
14 Sobic.001G195550 - -
15 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.007G080660 - -
17 Sobic.001G260900 - -
18 Sobic.004G087432 - -
19 Sobic.007G115050 - -
20 Sobic.005G145000 expressed protein -


Gene co-expression network
sample Sobic003G231400 Sobic003G231400 Sobic001G260550 Sobic001G260550 Sobic003G231400--Sobic001G260550 Sobic001G417100 Sobic001G417100 Sobic003G231400--Sobic001G417100 Sobic001G028301 Sobic001G028301 Sobic003G231400--Sobic001G028301 Sobic007G223150 Sobic007G223150 Sobic003G231400--Sobic007G223150 Sobic002G253300 Sobic002G253300 Sobic003G231400--Sobic002G253300 Sobic001G317900 Sobic001G317900 Sobic003G231400--Sobic001G317900 Sobic001G260550--Sobic003G231400 Sobic001G421250 Sobic001G421250 Sobic001G260550--Sobic001G421250 Sobic002G411200 Sobic002G411200 Sobic001G260550--Sobic002G411200 Sobic001G234733 Sobic001G234733 Sobic001G260550--Sobic001G234733 Sobic001G260550--Sobic001G417100 Sobic002G423901 Sobic002G423901 Sobic001G260550--Sobic002G423901 Sobic001G181400 Sobic001G181400 Sobic001G260550--Sobic001G181400 Sobic010G238000 Sobic010G238000 Sobic001G260550--Sobic010G238000 Sobic001G260550--Sobic001G028301 Sobic007G115050 Sobic007G115050 Sobic001G417100--Sobic007G115050 Sobic001G260900 Sobic001G260900 Sobic001G417100--Sobic001G260900 Sobic001G195550 Sobic001G195550 Sobic001G417100--Sobic001G195550 Sobic001G417100--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic001G417100--Sobic005G083932 Sobic008G174400 Sobic008G174400 Sobic001G417100--Sobic008G174400 Sobic001G028301--Sobic007G223150 Sobic001G028301--Sobic003G231400 Sobic001G028301--Sobic001G417100 Sobic002G373500 Sobic002G373500 Sobic001G028301--Sobic002G373500 Sobic001G028301--Sobic001G317900 Sobic001G028301--Sobic005G083932 Sobic007G223150--Sobic001G417100 Sobic007G223150--Sobic001G195550 Sobic004G346700 Sobic004G346700 Sobic007G223150--Sobic004G346700 Sobic007G223150--Sobic007G115050 Sobic002G174000 Sobic002G174000 Sobic007G223150--Sobic002G174000 Sobic007G135301 Sobic007G135301 Sobic007G223150--Sobic007G135301 Sobic007G223150--Sobic001G260900 Sobic005G134301 Sobic005G134301 Sobic007G223150--Sobic005G134301 Sobic007G223150--Sobic001G028301 Sobic004G081300 Sobic004G081300 Sobic002G253300--Sobic004G081300 Sobic007G114401 Sobic007G114401 Sobic002G253300--Sobic007G114401 Sobic002G253300--Sobic003G231400 Sobic009G046300 Sobic009G046300 Sobic002G253300--Sobic009G046300 Sobic002G253300--Sobic007G135301 Sobic005G225901 Sobic005G225901 Sobic002G253300--Sobic005G225901 Sobic002G253300--Sobic001G028301 Sobic005G035800 Sobic005G035800 Sobic002G253300--Sobic005G035800 Sobic002G097500 Sobic002G097500 Sobic002G253300--Sobic002G097500 Sobic001G317900--Sobic001G317900 Sobic001G317900--Sobic005G083932 Sobic001G317900--Sobic008G174400 Sobic002G191200 Sobic002G191200 Sobic001G317900--Sobic002G191200 Sobic001G317900--Sobic002G373500 Sobic010G127500 Sobic010G127500 Sobic001G317900--Sobic010G127500 Sobic007G080660 Sobic007G080660 Sobic001G317900--Sobic007G080660
Octagon: transcription factors


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