Gene annotation
Transcriptome id Sobic.003G232800.1
Synonym ATMYB3, MYB21, ATMYB21, Sb03g029050
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XEI8
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF531
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27810 : myb domain protein 21
RAP-DB (Rice) LOC_Os01g45090.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023641 , Zm00025a020986 , Zm00025a053274 , Zm00025a028298 , Zm00025a032127 , Zm00025a025444 , Zm00025a050283 , Zm00025a041179 , Zm00025a049338 , Zm00025a004179 , Zm00025a013472 , Zm00025a011116
Brachypodium KQK03128 , PNT69079 , PNT74485 , PNT74484 , KQJ95429 , KQK14343 , KQK00366 , PNT70109 , KQJ90159 , KQK00510 , KQK02514
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU4Hr1G049630.2 , HORVU4Hr1G049630.1 , HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU3Hr1G019590.1 , HORVU3Hr1G019590.3 , HORVU3Hr1G019590.2 , HORVU1Hr1G089770.2 , HORVU1Hr1G089770.1 , HORVU4Hr1G028780.6 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU2Hr1G087990.2 , HORVU6Hr1G060600.1 , HORVU6Hr1G060600.2 , HORVU6Hr1G060610.3 , HORVU6Hr1G060610.2 , HORVU6Hr1G060610.4 , HORVU1Hr1G008810.3 , HORVU1Hr1G008810.5 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.2 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.8 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU3Hr1G056980.1 , HORVU5Hr1G060650.10 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8 , HORVU2Hr1G087990.1 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.9
Wheat TraesCS7A02G130700 , TraesCS2B02G343800 , TraesCS1D02G043300 , TraesCS1D02G043300 , TraesCS3B02G258800 , TraesCS6D02G207300 , TraesCS1A02G406600 , TraesCS5B02G203100 , TraesCS2A02G363800 , TraesCS3B02G224500 , TraesCS3D02G223700 , TraesCS2A02G552400 , TraesCS4A02G172200 , TraesCS2B02G583800 , TraesCS3D02G109800 , TraesCSU02G069000 , TraesCS1D02G415000 , TraesCS5A02G205200 , TraesCS6B02G254200 , TraesCS4D02G142900 , TraesCS7B02G204800 , TraesCS5D02G210900 , TraesCS1B02G055200 , TraesCS1B02G023400 , TraesCS1A02G042700 , TraesCS3A02G200300 , TraesCS6D02G219300 , TraesCS2D02G361600 , TraesCS3A02G108000 , TraesCS6A02G236700 , TraesCS2B02G387800 , TraesCS2B02G381800 , TraesCS2D02G366900 , TraesCS7A02G304500 , TraesCS1D02G020900 , TraesCS2D02G324800 , TraesCS3A02G229500 , TraesCS2A02G338200 , TraesCS6B02G265200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G316100 DEFL71 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.003G175300 expressed protein -
3 Sobic.003G369800 - -
4 Sobic.007G035900 expressed protein -
5 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
6 Sobic.003G175700 - -
7 Sobic.010G144600 - -
8 Sobic.004G277501 - -
9 Sobic.002G023500 expressed protein -
10 Sobic.009G019550 - -
11 Sobic.006G239600 - -
12 Sobic.010G130900 glycine rich protein family protein, putative, expressed -
13 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.004G316000 DEFL74 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.001G123650 - -
16 Sobic.001G123650 - -
17 Sobic.001G123650 - -
18 Sobic.001G123650 - -
19 Sobic.001G123650 - -
20 Sobic.001G123650 - -


Gene co-expression network
sample Sobic003G232800 Sobic003G232800 Sobic004G316100 Sobic004G316100 Sobic003G232800--Sobic004G316100 Sobic003G175300 Sobic003G175300 Sobic003G232800--Sobic003G175300 Sobic003G369800 Sobic003G369800 Sobic003G232800--Sobic003G369800 Sobic007G035900 Sobic007G035900 Sobic003G232800--Sobic007G035900 Sobic010G237400 Sobic010G237400 Sobic003G232800--Sobic010G237400 Sobic003G175700 Sobic003G175700 Sobic003G232800--Sobic003G175700 Sobic010G144600 Sobic010G144600 Sobic003G232800--Sobic010G144600 Sobic004G277501 Sobic004G277501 Sobic003G232800--Sobic004G277501 Sobic002G023500 Sobic002G023500 Sobic003G232800--Sobic002G023500 Sobic004G316100--Sobic003G232800 Sobic004G316100--Sobic003G369800 Sobic004G316100--Sobic003G175300 Sobic004G316100--Sobic010G237400 Sobic004G316100--Sobic007G035900 Sobic004G316100--Sobic004G277501 Sobic004G316100--Sobic010G144600 Sobic004G316100--Sobic003G175700 Sobic009G059800 Sobic009G059800 Sobic004G316100--Sobic009G059800 Sobic003G175300--Sobic007G035900 Sobic003G175300--Sobic003G175700 Sobic003G175300--Sobic010G144600 Sobic003G175300--Sobic003G369800 Sobic006G239600 Sobic006G239600 Sobic003G175300--Sobic006G239600 Sobic003G175300--Sobic002G023500 Sobic007G014300 Sobic007G014300 Sobic003G175300--Sobic007G014300 Sobic001G123650 Sobic001G123650 Sobic003G175300--Sobic001G123650 Sobic003G369800--Sobic010G237400 Sobic003G369800--Sobic003G175300 Sobic003G369800--Sobic009G059800 Sobic002G102800 Sobic002G102800 Sobic003G369800--Sobic002G102800 Sobic009G059932 Sobic009G059932 Sobic003G369800--Sobic009G059932 Sobic004G056500 Sobic004G056500 Sobic003G369800--Sobic004G056500 Sobic003G369800--Sobic010G144600 Sobic009G059866 Sobic009G059866 Sobic003G369800--Sobic009G059866 Sobic007G218400 Sobic007G218400 Sobic003G369800--Sobic007G218400 Sobic007G035900--Sobic003G175700 Sobic007G035900--Sobic003G175300 Sobic007G035900--Sobic006G239600 Sobic007G035900--Sobic007G014300 Sobic007G035900--Sobic001G123650 Sobic010G237400--Sobic003G369800 Sobic010G237400--Sobic009G059800 Sobic010G237400--Sobic009G059932 Sobic010G237400--Sobic002G102800 Sobic010G237400--Sobic009G059866 Sobic010G237400--Sobic007G218400 Sobic010G237400--Sobic004G056500 Sobic010G237400--Sobic010G144600 Sobic010G237400--Sobic003G175300 Sobic003G175700--Sobic007G014300 Sobic003G175700--Sobic006G239600 Sobic003G175700--Sobic001G123650 Sobic010G144600--Sobic003G175700 Sobic010G144600--Sobic007G014300 Sobic010G144600--Sobic002G102800 Sobic010G144600--Sobic004G056500 Sobic010G144600--Sobic006G239600 Sobic010G144600--Sobic001G123650 Sobic004G277501--Sobic004G316100 Sobic004G277501--Sobic003G232800 Sobic010G154400 Sobic010G154400 Sobic004G277501--Sobic010G154400 Sobic004G277501--Sobic003G175300 Sobic001G461600 Sobic001G461600 Sobic004G277501--Sobic001G461600 Sobic004G277501--Sobic007G035900 Sobic004G277501--Sobic003G369800 Sobic004G254300 Sobic004G254300 Sobic004G277501--Sobic004G254300 Sobic004G277501--Sobic002G023500 Sobic010G130900 Sobic010G130900 Sobic002G023500--Sobic010G130900 Sobic002G023500--Sobic007G014300 Sobic002G023500--Sobic003G175700 Sobic004G316000 Sobic004G316000 Sobic002G023500--Sobic004G316000 Sobic002G023500--Sobic006G239600 Sobic002G023500--Sobic001G123650
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.