Gene annotation
Transcriptome id Sobic.004G316100.2
Synonym
Functional annotation DEFL71 - Defensin and Defensin-like DEFL family, expressed
UniProt A0A1Z5RPX3
Pfam PF07333
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g53590.1 : DEFL71 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G232800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.003G369800 - -
3 Sobic.003G175300 expressed protein -
4 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
5 Sobic.007G035900 expressed protein -
6 Sobic.004G277501 - -
7 Sobic.010G144600 - -
8 Sobic.003G175700 - -
9 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
10 Sobic.007G218400 - -
11 Sobic.002G023500 expressed protein -
12 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
13 Sobic.004G056500 - -
14 Sobic.009G059932 - -
15 Sobic.009G059866 - -
16 Sobic.009G019550 - -
17 Sobic.006G239600 - -
18 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
19 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
20 Sobic.010G130900 glycine rich protein family protein, putative, expressed -


Gene co-expression network
sample Sobic004G316100 Sobic004G316100 Sobic003G232800 Sobic003G232800 Sobic004G316100--Sobic003G232800 Sobic003G369800 Sobic003G369800 Sobic004G316100--Sobic003G369800 Sobic003G175300 Sobic003G175300 Sobic004G316100--Sobic003G175300 Sobic010G237400 Sobic010G237400 Sobic004G316100--Sobic010G237400 Sobic007G035900 Sobic007G035900 Sobic004G316100--Sobic007G035900 Sobic004G277501 Sobic004G277501 Sobic004G316100--Sobic004G277501 Sobic010G144600 Sobic010G144600 Sobic004G316100--Sobic010G144600 Sobic003G175700 Sobic003G175700 Sobic004G316100--Sobic003G175700 Sobic009G059800 Sobic009G059800 Sobic004G316100--Sobic009G059800 Sobic003G232800--Sobic004G316100 Sobic003G232800--Sobic003G175300 Sobic003G232800--Sobic003G369800 Sobic003G232800--Sobic007G035900 Sobic003G232800--Sobic010G237400 Sobic003G232800--Sobic003G175700 Sobic003G232800--Sobic010G144600 Sobic003G232800--Sobic004G277501 Sobic002G023500 Sobic002G023500 Sobic003G232800--Sobic002G023500 Sobic003G369800--Sobic010G237400 Sobic003G369800--Sobic003G175300 Sobic003G369800--Sobic009G059800 Sobic002G102800 Sobic002G102800 Sobic003G369800--Sobic002G102800 Sobic009G059932 Sobic009G059932 Sobic003G369800--Sobic009G059932 Sobic004G056500 Sobic004G056500 Sobic003G369800--Sobic004G056500 Sobic003G369800--Sobic010G144600 Sobic009G059866 Sobic009G059866 Sobic003G369800--Sobic009G059866 Sobic007G218400 Sobic007G218400 Sobic003G369800--Sobic007G218400 Sobic003G175300--Sobic007G035900 Sobic003G175300--Sobic003G175700 Sobic003G175300--Sobic010G144600 Sobic003G175300--Sobic003G369800 Sobic006G239600 Sobic006G239600 Sobic003G175300--Sobic006G239600 Sobic003G175300--Sobic002G023500 Sobic007G014300 Sobic007G014300 Sobic003G175300--Sobic007G014300 Sobic001G123650 Sobic001G123650 Sobic003G175300--Sobic001G123650 Sobic010G237400--Sobic003G369800 Sobic010G237400--Sobic009G059800 Sobic010G237400--Sobic009G059932 Sobic010G237400--Sobic002G102800 Sobic010G237400--Sobic009G059866 Sobic010G237400--Sobic007G218400 Sobic010G237400--Sobic004G056500 Sobic010G237400--Sobic010G144600 Sobic010G237400--Sobic003G175300 Sobic007G035900--Sobic003G175700 Sobic007G035900--Sobic003G175300 Sobic007G035900--Sobic006G239600 Sobic007G035900--Sobic007G014300 Sobic007G035900--Sobic001G123650 Sobic004G277501--Sobic004G316100 Sobic004G277501--Sobic003G232800 Sobic010G154400 Sobic010G154400 Sobic004G277501--Sobic010G154400 Sobic004G277501--Sobic003G175300 Sobic001G461600 Sobic001G461600 Sobic004G277501--Sobic001G461600 Sobic004G277501--Sobic007G035900 Sobic004G277501--Sobic003G369800 Sobic004G254300 Sobic004G254300 Sobic004G277501--Sobic004G254300 Sobic004G277501--Sobic002G023500 Sobic010G144600--Sobic003G175700 Sobic010G144600--Sobic007G014300 Sobic010G144600--Sobic002G102800 Sobic010G144600--Sobic004G056500 Sobic010G144600--Sobic006G239600 Sobic010G144600--Sobic001G123650 Sobic003G175700--Sobic007G014300 Sobic003G175700--Sobic006G239600 Sobic003G175700--Sobic001G123650 Sobic009G059800--Sobic009G059932 Sobic009G059800--Sobic010G237400 Sobic009G059800--Sobic009G059866 Sobic009G059800--Sobic007G218400 Sobic009G059800--Sobic002G102800 Sobic009G059800--Sobic004G056500 Sobic009G059800--Sobic003G369800 Sobic009G059800--Sobic010G144600 Sobic009G059800--Sobic004G254300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.