Gene annotation
Transcriptome id Sobic.003G245000.1
Synonym Sb03g030130
Functional annotation expressed protein
UniProt C5XFC6
Pfam -
Panther DB PTHR33994 PTHR33994:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g56500.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G421450 - -
2 Sobic.006G141200 - -
3 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
4 Sobic.005G150250 - -
5 Sobic.002G321000 - -
6 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.008G109650 - -
8 Sobic.002G132201 - -
9 Sobic.001G084133 - -
10 Sobic.004G089801 - -
11 Sobic.003G253650 - -
12 Sobic.010G262950 - -
13 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G273950 - -
15 Sobic.003G193900 - -
16 Sobic.009G169300 expressed protein -
17 Sobic.006G155400 expressed protein -
18 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
19 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G245000 Sobic003G245000 Sobic001G421450 Sobic001G421450 Sobic003G245000--Sobic001G421450 Sobic006G141200 Sobic006G141200 Sobic003G245000--Sobic006G141200 Sobic003G149700 Sobic003G149700 Sobic003G245000--Sobic003G149700 Sobic005G150250 Sobic005G150250 Sobic003G245000--Sobic005G150250 Sobic002G321000 Sobic002G321000 Sobic003G245000--Sobic002G321000 Sobic006G222200 Sobic006G222200 Sobic003G245000--Sobic006G222200 Sobic008G109650 Sobic008G109650 Sobic003G245000--Sobic008G109650 Sobic002G132201 Sobic002G132201 Sobic003G245000--Sobic002G132201 Sobic001G084133 Sobic001G084133 Sobic003G245000--Sobic001G084133 Sobic001G421450--Sobic003G245000 Sobic001G421450--Sobic003G149700 Sobic001G421450--Sobic001G084133 Sobic001G421450--Sobic005G150250 Sobic003G193900 Sobic003G193900 Sobic001G421450--Sobic003G193900 Sobic001G421450--Sobic002G132201 Sobic003G356500 Sobic003G356500 Sobic001G421450--Sobic003G356500 Sobic001G421450--Sobic006G222200 Sobic006G155400 Sobic006G155400 Sobic001G421450--Sobic006G155400 Sobic006G141200--Sobic003G149700 Sobic006G141200--Sobic002G132201 Sobic002G054800 Sobic002G054800 Sobic006G141200--Sobic002G054800 Sobic001G071500 Sobic001G071500 Sobic006G141200--Sobic001G071500 Sobic001G273950 Sobic001G273950 Sobic006G141200--Sobic001G273950 Sobic006G141200--Sobic003G245000 Sobic005G073300 Sobic005G073300 Sobic006G141200--Sobic005G073300 Sobic010G215201 Sobic010G215201 Sobic006G141200--Sobic010G215201 Sobic003G253650 Sobic003G253650 Sobic006G141200--Sobic003G253650 Sobic003G149700--Sobic002G132201 Sobic003G149700--Sobic005G150250 Sobic003G149700--Sobic005G073300 Sobic009G022600 Sobic009G022600 Sobic003G149700--Sobic009G022600 Sobic003G149700--Sobic006G155400 Sobic003G149700--Sobic002G054800 Sobic003G149700--Sobic001G071500 Sobic003G149700--Sobic003G356500 Sobic003G149700--Sobic003G193900 Sobic005G150250--Sobic006G155400 Sobic005G150250--Sobic003G149700 Sobic005G150250--Sobic006G222200 Sobic005G150250--Sobic002G132201 Sobic005G150250--Sobic003G356500 Sobic005G150250--Sobic009G022600 Sobic005G150250--Sobic003G193900 Sobic005G150250--Sobic005G073300 Sobic006G210600 Sobic006G210600 Sobic005G150250--Sobic006G210600 Sobic002G321000--Sobic003G245000 Sobic002G321000--Sobic008G109650 Sobic002G321000--Sobic006G222200 Sobic002G321000--Sobic001G421450 Sobic002G033100 Sobic002G033100 Sobic002G321000--Sobic002G033100 Sobic010G262950 Sobic010G262950 Sobic002G321000--Sobic010G262950 Sobic002G321000--Sobic001G084133 Sobic004G272000 Sobic004G272000 Sobic002G321000--Sobic004G272000 Sobic004G089801 Sobic004G089801 Sobic002G321000--Sobic004G089801 Sobic001G221750 Sobic001G221750 Sobic006G222200--Sobic001G221750 Sobic006G222200--Sobic005G150250 Sobic006G222200--Sobic002G033100 Sobic006G222200--Sobic006G155400 Sobic001G005100 Sobic001G005100 Sobic006G222200--Sobic001G005100 Sobic010G129900 Sobic010G129900 Sobic006G222200--Sobic010G129900 Sobic001G112300 Sobic001G112300 Sobic006G222200--Sobic001G112300 Sobic006G222200--Sobic001G084133 Sobic006G222200--Sobic003G245000 Sobic008G109650--Sobic003G245000 Sobic001G209550 Sobic001G209550 Sobic008G109650--Sobic001G209550 Sobic001G208166 Sobic001G208166 Sobic008G109650--Sobic001G208166 Sobic006G147101 Sobic006G147101 Sobic008G109650--Sobic006G147101 Sobic008G109650--Sobic002G321000 Sobic002G059700 Sobic002G059700 Sobic008G109650--Sobic002G059700 Sobic008G109650--Sobic001G084133 Sobic008G109650--Sobic004G272000 Sobic002G347850 Sobic002G347850 Sobic008G109650--Sobic002G347850 Sobic002G132201--Sobic002G054800 Sobic002G132201--Sobic005G073300 Sobic002G132201--Sobic003G149700 Sobic002G132201--Sobic001G071500 Sobic002G240200 Sobic002G240200 Sobic002G132201--Sobic002G240200 Sobic002G132201--Sobic009G022600 Sobic002G132201--Sobic010G215201 Sobic001G371650 Sobic001G371650 Sobic002G132201--Sobic001G371650 Sobic002G132201--Sobic006G155400 Sobic001G084133--Sobic004G089801 Sobic005G230900 Sobic005G230900 Sobic001G084133--Sobic005G230900 Sobic001G084133--Sobic001G421450 Sobic001G084133--Sobic006G222200 Sobic001G084133--Sobic003G356500 Sobic001G084133--Sobic003G193900 Sobic001G084133--Sobic004G272000 Sobic001G084133--Sobic002G033100 Sobic001G084133--Sobic003G245000
Octagon: transcription factors


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