Gene annotation
Transcriptome id Sobic.010G262950.1
Synonym -
Functional annotation -
UniProt A0A1W0VV24
Pfam -
Panther DB PTHR32212 PTHR32212:SF139
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g42230.1 : OsFBX430 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.001G221750 - -
3 Sobic.003G245000 expressed protein -
4 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.005G150250 - -
6 Sobic.006G155400 expressed protein -
7 Sobic.001G084133 - -
8 Sobic.001G421450 - -
9 Sobic.003G193900 - -
10 Sobic.002G321000 - -
11 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
12 Sobic.004G089801 - -
13 Sobic.001G005100 lipid binding protein, putative, expressed -
14 Sobic.002G240300 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
15 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G132201 - -
17 Sobic.004G272000 - -
18 Sobic.005G230900 GRAS family transcription factor domain containing protein, expressed -
19 Sobic.003G059500 verticillium wilt disease resistance protein, putative, expressed -
20 Sobic.010G129900 expressed protein -


Gene co-expression network
sample Sobic010G262950 Sobic010G262950 Sobic006G222200 Sobic006G222200 Sobic010G262950--Sobic006G222200 Sobic001G221750 Sobic001G221750 Sobic010G262950--Sobic001G221750 Sobic003G245000 Sobic003G245000 Sobic010G262950--Sobic003G245000 Sobic002G033100 Sobic002G033100 Sobic010G262950--Sobic002G033100 Sobic005G150250 Sobic005G150250 Sobic010G262950--Sobic005G150250 Sobic006G155400 Sobic006G155400 Sobic010G262950--Sobic006G155400 Sobic001G084133 Sobic001G084133 Sobic010G262950--Sobic001G084133 Sobic001G421450 Sobic001G421450 Sobic010G262950--Sobic001G421450 Sobic003G193900 Sobic003G193900 Sobic010G262950--Sobic003G193900 Sobic006G222200--Sobic001G221750 Sobic006G222200--Sobic005G150250 Sobic006G222200--Sobic002G033100 Sobic006G222200--Sobic006G155400 Sobic001G005100 Sobic001G005100 Sobic006G222200--Sobic001G005100 Sobic010G129900 Sobic010G129900 Sobic006G222200--Sobic010G129900 Sobic001G112300 Sobic001G112300 Sobic006G222200--Sobic001G112300 Sobic006G222200--Sobic001G084133 Sobic006G222200--Sobic003G245000 Sobic001G221750--Sobic006G222200 Sobic001G221750--Sobic002G033100 Sobic001G221750--Sobic010G129900 Sobic001G221750--Sobic001G112300 Sobic001G221750--Sobic006G155400 Sobic001G221750--Sobic001G005100 Sobic001G221750--Sobic005G150250 Sobic007G069750 Sobic007G069750 Sobic001G221750--Sobic007G069750 Sobic002G237400 Sobic002G237400 Sobic001G221750--Sobic002G237400 Sobic003G245000--Sobic001G421450 Sobic006G141200 Sobic006G141200 Sobic003G245000--Sobic006G141200 Sobic003G149700 Sobic003G149700 Sobic003G245000--Sobic003G149700 Sobic003G245000--Sobic005G150250 Sobic002G321000 Sobic002G321000 Sobic003G245000--Sobic002G321000 Sobic003G245000--Sobic006G222200 Sobic008G109650 Sobic008G109650 Sobic003G245000--Sobic008G109650 Sobic002G132201 Sobic002G132201 Sobic003G245000--Sobic002G132201 Sobic003G245000--Sobic001G084133 Sobic002G033100--Sobic006G222200 Sobic002G033100--Sobic001G005100 Sobic002G033100--Sobic001G221750 Sobic002G033100--Sobic005G150250 Sobic002G033100--Sobic002G237400 Sobic002G033100--Sobic006G155400 Sobic003G278800 Sobic003G278800 Sobic002G033100--Sobic003G278800 Sobic002G033100--Sobic001G084133 Sobic004G089801 Sobic004G089801 Sobic002G033100--Sobic004G089801 Sobic005G150250--Sobic006G155400 Sobic005G150250--Sobic003G149700 Sobic005G150250--Sobic006G222200 Sobic005G150250--Sobic002G132201 Sobic003G356500 Sobic003G356500 Sobic005G150250--Sobic003G356500 Sobic009G022600 Sobic009G022600 Sobic005G150250--Sobic009G022600 Sobic005G150250--Sobic003G193900 Sobic005G073300 Sobic005G073300 Sobic005G150250--Sobic005G073300 Sobic006G210600 Sobic006G210600 Sobic005G150250--Sobic006G210600 Sobic006G155400--Sobic005G150250 Sobic006G155400--Sobic003G149700 Sobic006G155400--Sobic009G022600 Sobic006G155400--Sobic002G132201 Sobic006G155400--Sobic006G222200 Sobic006G155400--Sobic003G356500 Sobic006G155400--Sobic003G193900 Sobic006G155400--Sobic006G210600 Sobic006G155400--Sobic005G073300 Sobic001G084133--Sobic004G089801 Sobic005G230900 Sobic005G230900 Sobic001G084133--Sobic005G230900 Sobic001G084133--Sobic001G421450 Sobic001G084133--Sobic006G222200 Sobic001G084133--Sobic003G356500 Sobic001G084133--Sobic003G193900 Sobic004G272000 Sobic004G272000 Sobic001G084133--Sobic004G272000 Sobic001G084133--Sobic002G033100 Sobic001G084133--Sobic003G245000 Sobic001G421450--Sobic003G245000 Sobic001G421450--Sobic003G149700 Sobic001G421450--Sobic001G084133 Sobic001G421450--Sobic005G150250 Sobic001G421450--Sobic003G193900 Sobic001G421450--Sobic002G132201 Sobic001G421450--Sobic003G356500 Sobic001G421450--Sobic006G222200 Sobic001G421450--Sobic006G155400 Sobic003G193900--Sobic003G149700 Sobic003G193900--Sobic006G155400 Sobic003G193900--Sobic005G150250 Sobic003G193900--Sobic002G132201 Sobic003G193900--Sobic003G356500 Sobic003G193900--Sobic009G022600 Sobic003G193900--Sobic001G421450 Sobic003G193900--Sobic001G084133 Sobic003G193900--Sobic006G222200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.