Gene annotation
Transcriptome id Sobic.003G257050.1
Synonym -
Functional annotation -
UniProt A0A1W0VYZ0
Pfam PF01780
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G10950 : Zinc-binding ribosomal protein family protein
RAP-DB (Rice) LOC_Os05g48320.1 : 60S ribosomal protein L37a, putative, expressed
MaizeGDB (Corn) Zm00025a019019
Brachypodium KQK09189
Barley HORVU7Hr1G081910.4 , HORVU7Hr1G081910.5 , HORVU7Hr1G081910.2 , HORVU7Hr1G081910.3 , HORVU7Hr1G081910.1
Wheat TraesCS7A02G331900 , TraesCS7D02G340100 , TraesCS7D02G340100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G274850 - -
2 Sobic.002G226600 - -
3 Sobic.004G342700 C2 domain containing protein, putative, expressed -
4 Sobic.006G246800 MBTB56 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.004G355101 - -
6 Sobic.006G035950 - -
7 Sobic.010G228300 expressed protein -
8 Sobic.008G176401 - -
9 Sobic.001G121000 - -
10 Sobic.003G014832 - -
11 Sobic.001G285700 expressed protein -
12 Sobic.003G372750 - K14565: nucleolar protein 58
13 Sobic.002G268450 - -
14 Sobic.009G174200 S-domain receptor-like protein kinase, putative, expressed -
15 Sobic.004G087750 - -
16 Sobic.004G019250 - -
17 Sobic.009G142700 - -
18 Sobic.007G095850 - -
19 Sobic.007G215300 expressed protein -
20 Sobic.002G249400 auxin efflux carrier component, putative, expressed -


Gene co-expression network
sample Sobic003G257050 Sobic003G257050 Sobic002G274850 Sobic002G274850 Sobic003G257050--Sobic002G274850 Sobic002G226600 Sobic002G226600 Sobic003G257050--Sobic002G226600 Sobic004G342700 Sobic004G342700 Sobic003G257050--Sobic004G342700 Sobic006G246800 Sobic006G246800 Sobic003G257050--Sobic006G246800 Sobic004G355101 Sobic004G355101 Sobic003G257050--Sobic004G355101 Sobic006G035950 Sobic006G035950 Sobic003G257050--Sobic006G035950 Sobic010G228300 Sobic010G228300 Sobic003G257050--Sobic010G228300 Sobic008G176401 Sobic008G176401 Sobic003G257050--Sobic008G176401 Sobic001G121000 Sobic001G121000 Sobic003G257050--Sobic001G121000 Sobic002G274850--Sobic002G226600 Sobic009G142700 Sobic009G142700 Sobic002G274850--Sobic009G142700 Sobic002G274850--Sobic010G228300 Sobic002G274850--Sobic001G121000 Sobic002G274850--Sobic006G246800 Sobic001G285700 Sobic001G285700 Sobic002G274850--Sobic001G285700 Sobic007G215300 Sobic007G215300 Sobic002G274850--Sobic007G215300 Sobic002G274850--Sobic004G355101 Sobic002G274850--Sobic006G035950 Sobic002G226600--Sobic006G246800 Sobic002G226600--Sobic004G355101 Sobic002G226600--Sobic006G035950 Sobic002G226600--Sobic002G274850 Sobic002G226600--Sobic001G121000 Sobic002G226600--Sobic004G342700 Sobic002G226600--Sobic001G285700 Sobic002G226600--Sobic008G176401 Sobic002G268450 Sobic002G268450 Sobic002G226600--Sobic002G268450 Sobic004G342700--Sobic008G176401 Sobic004G342700--Sobic006G246800 Sobic009G174200 Sobic009G174200 Sobic004G342700--Sobic009G174200 Sobic004G087750 Sobic004G087750 Sobic004G342700--Sobic004G087750 Sobic003G014832 Sobic003G014832 Sobic004G342700--Sobic003G014832 Sobic004G342700--Sobic004G355101 Sobic004G342700--Sobic006G035950 Sobic004G019250 Sobic004G019250 Sobic004G342700--Sobic004G019250 Sobic004G342700--Sobic002G268450 Sobic006G246800--Sobic004G355101 Sobic006G246800--Sobic006G035950 Sobic006G246800--Sobic004G342700 Sobic006G246800--Sobic008G176401 Sobic006G246800--Sobic001G121000 Sobic006G246800--Sobic003G014832 Sobic006G246800--Sobic002G268450 Sobic006G246800--Sobic001G285700 Sobic006G246800--Sobic010G228300 Sobic004G355101--Sobic006G246800 Sobic004G355101--Sobic006G035950 Sobic004G355101--Sobic004G342700 Sobic004G355101--Sobic008G176401 Sobic004G355101--Sobic001G121000 Sobic004G355101--Sobic003G014832 Sobic004G355101--Sobic002G268450 Sobic004G355101--Sobic001G285700 Sobic004G355101--Sobic010G228300 Sobic006G035950--Sobic006G246800 Sobic006G035950--Sobic001G285700 Sobic006G035950--Sobic004G355101 Sobic006G035950--Sobic004G342700 Sobic006G035950--Sobic008G176401 Sobic006G035950--Sobic001G121000 Sobic006G035950--Sobic003G014832 Sobic006G035950--Sobic002G268450 Sobic006G035950--Sobic010G228300 Sobic010G228300--Sobic007G215300 Sobic010G228300--Sobic001G121000 Sobic007G095850 Sobic007G095850 Sobic010G228300--Sobic007G095850 Sobic010G228300--Sobic009G142700 Sobic001G213150 Sobic001G213150 Sobic010G228300--Sobic001G213150 Sobic010G228300--Sobic001G285700 Sobic005G204400 Sobic005G204400 Sobic010G228300--Sobic005G204400 Sobic003G060900 Sobic003G060900 Sobic010G228300--Sobic003G060900 Sobic009G029800 Sobic009G029800 Sobic010G228300--Sobic009G029800 Sobic008G176401--Sobic004G342700 Sobic008G176401--Sobic009G174200 Sobic008G176401--Sobic004G087750 Sobic008G176401--Sobic003G014832 Sobic008G176401--Sobic006G246800 Sobic008G176401--Sobic002G268450 Sobic008G176401--Sobic004G355101 Sobic008G176401--Sobic006G035950 Sobic008G176401--Sobic004G019250 Sobic001G121000--Sobic006G246800 Sobic001G121000--Sobic010G228300 Sobic001G121000--Sobic001G285700 Sobic001G121000--Sobic004G355101 Sobic001G121000--Sobic006G035950 Sobic001G121000--Sobic007G215300 Sobic001G121000--Sobic002G268450 Sobic001G121000--Sobic007G095850 Sobic001G121000--Sobic009G142700
Octagon: transcription factors


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