Gene annotation
Transcriptome id Sobic.003G372750.1
Synonym -
Functional annotation -
UniProt C5XRA5
Pfam -
Panther DB PTHR10894 PTHR10894:SF3
NCBI CDD -
KEGG Orthology K14565; nucleolar protein 58
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g34230.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3D02G201200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228300 expressed protein -
2 Sobic.006G246800 MBTB56 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.004G355101 - -
4 Sobic.001G121000 - -
5 Sobic.006G035950 - -
6 Sobic.001G285700 expressed protein -
7 Sobic.007G215300 expressed protein -
8 Sobic.004G342700 C2 domain containing protein, putative, expressed -
9 Sobic.007G095850 - -
10 Sobic.009G142700 - -
11 Sobic.002G268450 - -
12 Sobic.008G176401 - -
13 Sobic.003G014832 - -
14 Sobic.002G226600 - -
15 Sobic.005G204400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.002G407500 sex determination protein tasselseed-2, putative, expressed -
17 Sobic.002G249400 auxin efflux carrier component, putative, expressed -
18 Sobic.001G213150 - -
19 Sobic.002G274850 - -
20 Sobic.009G029800 endoglucanase, putative, expressed -


Gene co-expression network
sample Sobic003G372750 Sobic003G372750 Sobic010G228300 Sobic010G228300 Sobic003G372750--Sobic010G228300 Sobic006G246800 Sobic006G246800 Sobic003G372750--Sobic006G246800 Sobic004G355101 Sobic004G355101 Sobic003G372750--Sobic004G355101 Sobic001G121000 Sobic001G121000 Sobic003G372750--Sobic001G121000 Sobic006G035950 Sobic006G035950 Sobic003G372750--Sobic006G035950 Sobic001G285700 Sobic001G285700 Sobic003G372750--Sobic001G285700 Sobic007G215300 Sobic007G215300 Sobic003G372750--Sobic007G215300 Sobic004G342700 Sobic004G342700 Sobic003G372750--Sobic004G342700 Sobic007G095850 Sobic007G095850 Sobic003G372750--Sobic007G095850 Sobic010G228300--Sobic007G215300 Sobic010G228300--Sobic001G121000 Sobic010G228300--Sobic007G095850 Sobic009G142700 Sobic009G142700 Sobic010G228300--Sobic009G142700 Sobic001G213150 Sobic001G213150 Sobic010G228300--Sobic001G213150 Sobic010G228300--Sobic001G285700 Sobic005G204400 Sobic005G204400 Sobic010G228300--Sobic005G204400 Sobic003G060900 Sobic003G060900 Sobic010G228300--Sobic003G060900 Sobic009G029800 Sobic009G029800 Sobic010G228300--Sobic009G029800 Sobic006G246800--Sobic004G355101 Sobic006G246800--Sobic006G035950 Sobic006G246800--Sobic004G342700 Sobic008G176401 Sobic008G176401 Sobic006G246800--Sobic008G176401 Sobic006G246800--Sobic001G121000 Sobic003G014832 Sobic003G014832 Sobic006G246800--Sobic003G014832 Sobic002G268450 Sobic002G268450 Sobic006G246800--Sobic002G268450 Sobic006G246800--Sobic001G285700 Sobic006G246800--Sobic010G228300 Sobic004G355101--Sobic006G246800 Sobic004G355101--Sobic006G035950 Sobic004G355101--Sobic004G342700 Sobic004G355101--Sobic008G176401 Sobic004G355101--Sobic001G121000 Sobic004G355101--Sobic003G014832 Sobic004G355101--Sobic002G268450 Sobic004G355101--Sobic001G285700 Sobic004G355101--Sobic010G228300 Sobic001G121000--Sobic006G246800 Sobic001G121000--Sobic010G228300 Sobic001G121000--Sobic001G285700 Sobic001G121000--Sobic004G355101 Sobic001G121000--Sobic006G035950 Sobic001G121000--Sobic007G215300 Sobic001G121000--Sobic002G268450 Sobic001G121000--Sobic007G095850 Sobic001G121000--Sobic009G142700 Sobic006G035950--Sobic006G246800 Sobic006G035950--Sobic001G285700 Sobic006G035950--Sobic004G355101 Sobic006G035950--Sobic004G342700 Sobic006G035950--Sobic008G176401 Sobic006G035950--Sobic001G121000 Sobic006G035950--Sobic003G014832 Sobic006G035950--Sobic002G268450 Sobic006G035950--Sobic010G228300 Sobic001G285700--Sobic006G035950 Sobic001G285700--Sobic001G121000 Sobic001G285700--Sobic006G246800 Sobic001G285700--Sobic004G355101 Sobic001G285700--Sobic010G228300 Sobic001G285700--Sobic007G215300 Sobic001G285700--Sobic007G095850 Sobic001G285700--Sobic009G142700 Sobic001G285700--Sobic002G268450 Sobic007G215300--Sobic001G213150 Sobic007G215300--Sobic009G029800 Sobic007G215300--Sobic003G060900 Sobic007G215300--Sobic005G204400 Sobic007G215300--Sobic010G228300 Sobic007G215300--Sobic009G142700 Sobic007G215300--Sobic007G095850 Sobic010G273200 Sobic010G273200 Sobic007G215300--Sobic010G273200 Sobic005G144101 Sobic005G144101 Sobic007G215300--Sobic005G144101 Sobic004G342700--Sobic008G176401 Sobic004G342700--Sobic006G246800 Sobic009G174200 Sobic009G174200 Sobic004G342700--Sobic009G174200 Sobic004G087750 Sobic004G087750 Sobic004G342700--Sobic004G087750 Sobic004G342700--Sobic003G014832 Sobic004G342700--Sobic004G355101 Sobic004G342700--Sobic006G035950 Sobic004G019250 Sobic004G019250 Sobic004G342700--Sobic004G019250 Sobic004G342700--Sobic002G268450 Sobic007G095850--Sobic007G215300 Sobic007G095850--Sobic010G228300 Sobic007G095850--Sobic001G213150 Sobic007G095850--Sobic001G121000 Sobic007G095850--Sobic009G142700 Sobic007G095850--Sobic003G060900 Sobic007G095850--Sobic009G029800 Sobic007G095850--Sobic005G204400 Sobic007G095850--Sobic001G285700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.