Gene annotation
Transcriptome id Sobic.003G437900.1
Synonym Sb03g046840, emb1075
Functional annotation decarboxylase, putative, expressed
UniProt C5XIQ0
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF110
NCBI CDD KOG0629; Glutamate decarboxylase and related proteins
KEGG Orthology K01590; hdc, histidine decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT1G43710 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os02g33710.1 : decarboxylase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G112520.2 , HORVU3Hr1G112520.3 , HORVU3Hr1G112520.1 , HORVU3Hr1G112520.6 , HORVU3Hr1G112520.7 , HORVU3Hr1G112520.4 , HORVU3Hr1G112520.5 , HORVU3Hr1G112520.8
Wheat TraesCS3D02G519600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097300 CHCH domain containing protein, expressed -
2 Sobic.009G185601 - -
3 Sobic.005G120466 - -
4 Sobic.003G090100 seven in absentia protein family domain containing protein, expressed -
5 Sobic.005G207900 zinc knuckle family protein, expressed -
6 Sobic.010G158300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.007G078400 transketolase, chloroplast precursor, putative, expressed -
8 Sobic.003G066200 expressed protein -
9 Sobic.004G093300 interferon-related developmental regulator family protein, putative, expressed -
10 Sobic.001G436850 - -
11 Sobic.002G218350 - -
12 Sobic.001G146450 - -
13 Sobic.005G193900 DNA binding protein, putative, expressed -
14 Sobic.001G374301 - -
15 Sobic.006G089200 expressed protein -
16 Sobic.003G072100 D-mannose binding lectin family protein, expressed -
17 Sobic.009G219601 - -
18 Sobic.001G185700 expressed protein -
19 Sobic.003G094850 - -
20 Sobic.001G236950 - -


Gene co-expression network
sample Sobic003G437900 Sobic003G437900 Sobic001G097300 Sobic001G097300 Sobic003G437900--Sobic001G097300 Sobic009G185601 Sobic009G185601 Sobic003G437900--Sobic009G185601 Sobic005G120466 Sobic005G120466 Sobic003G437900--Sobic005G120466 Sobic003G090100 Sobic003G090100 Sobic003G437900--Sobic003G090100 Sobic005G207900 Sobic005G207900 Sobic003G437900--Sobic005G207900 Sobic010G158300 Sobic010G158300 Sobic003G437900--Sobic010G158300 Sobic007G078400 Sobic007G078400 Sobic003G437900--Sobic007G078400 Sobic003G066200 Sobic003G066200 Sobic003G437900--Sobic003G066200 Sobic004G093300 Sobic004G093300 Sobic003G437900--Sobic004G093300 Sobic001G097300--Sobic009G185601 Sobic001G183900 Sobic001G183900 Sobic001G097300--Sobic001G183900 Sobic003G072100 Sobic003G072100 Sobic001G097300--Sobic003G072100 Sobic001G146450 Sobic001G146450 Sobic001G097300--Sobic001G146450 Sobic004G246950 Sobic004G246950 Sobic001G097300--Sobic004G246950 Sobic001G436850 Sobic001G436850 Sobic001G097300--Sobic001G436850 Sobic006G089200 Sobic006G089200 Sobic001G097300--Sobic006G089200 Sobic003G094850 Sobic003G094850 Sobic001G097300--Sobic003G094850 Sobic001G018700 Sobic001G018700 Sobic001G097300--Sobic001G018700 Sobic009G185601--Sobic001G097300 Sobic009G185601--Sobic001G146450 Sobic001G374301 Sobic001G374301 Sobic009G185601--Sobic001G374301 Sobic009G185601--Sobic005G120466 Sobic007G086400 Sobic007G086400 Sobic009G185601--Sobic007G086400 Sobic009G185601--Sobic004G093300 Sobic009G185601--Sobic001G018700 Sobic001G328850 Sobic001G328850 Sobic005G120466--Sobic001G328850 Sobic003G178101 Sobic003G178101 Sobic005G120466--Sobic003G178101 Sobic003G384650 Sobic003G384650 Sobic005G120466--Sobic003G384650 Sobic001G211101 Sobic001G211101 Sobic005G120466--Sobic001G211101 Sobic006G075650 Sobic006G075650 Sobic005G120466--Sobic006G075650 Sobic001G185700 Sobic001G185700 Sobic005G120466--Sobic001G185700 Sobic003G405400 Sobic003G405400 Sobic005G120466--Sobic003G405400 Sobic005G120466--Sobic001G018700 Sobic003G090100--Sobic005G207900 Sobic007G007250 Sobic007G007250 Sobic003G090100--Sobic007G007250 Sobic008G028850 Sobic008G028850 Sobic003G090100--Sobic008G028850 Sobic003G090100--Sobic001G018700 Sobic005G207900--Sobic003G090100 Sobic005G207900--Sobic001G018700 Sobic002G218350 Sobic002G218350 Sobic010G158300--Sobic002G218350 Sobic010G158300--Sobic007G078400 Sobic010G158300--Sobic006G089200 Sobic010G158300--Sobic001G018700 Sobic007G078400--Sobic002G218350 Sobic007G078400--Sobic010G158300 Sobic009G219601 Sobic009G219601 Sobic007G078400--Sobic009G219601 Sobic007G078400--Sobic001G018700 Sobic003G066200--Sobic001G018700 Sobic004G093300--Sobic009G185601 Sobic004G093300--Sobic005G120466 Sobic004G093300--Sobic007G086400 Sobic004G093300--Sobic001G097300 Sobic003G095301 Sobic003G095301 Sobic004G093300--Sobic003G095301 Sobic004G093300--Sobic003G437900 Sobic007G002400 Sobic007G002400 Sobic004G093300--Sobic007G002400 Sobic003G123800 Sobic003G123800 Sobic004G093300--Sobic003G123800 Sobic009G005000 Sobic009G005000 Sobic004G093300--Sobic009G005000
Octagon: transcription factors


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