Gene annotation
Transcriptome id Sobic.004G115900.1
Synonym Sb04g009640
Functional annotation expressed protein
UniProt C5XZH5
Pfam -
Panther DB PTHR33513 PTHR33513:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41761 : -
RAP-DB (Rice) LOC_Os02g15860.1 : expressed protein
MaizeGDB (Corn) Zm00025a042369 , Zm00025a019905 , Zm00025a042370 , Zm00025a050848
Brachypodium KQK18064
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G115900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G076600 - -
2 Sobic.010G199900 extracellular ligand-gated ion channel, putative, expressed -
3 Sobic.006G272700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
4 Sobic.010G046700 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.002G207100 - -
6 Sobic.003G064300 - -
7 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
8 Sobic.009G076700 expressed protein -
9 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
10 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
11 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
13 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
14 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
15 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
16 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
17 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
18 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
19 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
20 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G115900 Sobic004G115900 Sobic009G076600 Sobic009G076600 Sobic004G115900--Sobic009G076600 Sobic010G199900 Sobic010G199900 Sobic004G115900--Sobic010G199900 Sobic006G272700 Sobic006G272700 Sobic004G115900--Sobic006G272700 Sobic010G046700 Sobic010G046700 Sobic004G115900--Sobic010G046700 Sobic002G207100 Sobic002G207100 Sobic004G115900--Sobic002G207100 Sobic003G064300 Sobic003G064300 Sobic004G115900--Sobic003G064300 Sobic007G143200 Sobic007G143200 Sobic004G115900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic004G115900--Sobic009G076700 Sobic001G210200 Sobic001G210200 Sobic004G115900--Sobic001G210200 Sobic009G076600--Sobic009G076700 Sobic009G076600--Sobic007G143200 Sobic007G143100 Sobic007G143100 Sobic009G076600--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic009G076600--Sobic005G016900 Sobic007G073750 Sobic007G073750 Sobic009G076600--Sobic007G073750 Sobic007G169600 Sobic007G169600 Sobic009G076600--Sobic007G169600 Sobic002G037400 Sobic002G037400 Sobic009G076600--Sobic002G037400 Sobic002G331450 Sobic002G331450 Sobic009G076600--Sobic002G331450 Sobic003G397400 Sobic003G397400 Sobic009G076600--Sobic003G397400 Sobic010G199900--Sobic010G046700 Sobic008G075600 Sobic008G075600 Sobic010G199900--Sobic008G075600 Sobic004G340800 Sobic004G340800 Sobic010G199900--Sobic004G340800 Sobic010G199900--Sobic004G115900 Sobic003G437800 Sobic003G437800 Sobic010G199900--Sobic003G437800 Sobic010G199900--Sobic003G064300 Sobic002G137800 Sobic002G137800 Sobic010G199900--Sobic002G137800 Sobic010G231900 Sobic010G231900 Sobic010G199900--Sobic010G231900 Sobic010G199900--Sobic006G272700 Sobic001G027800 Sobic001G027800 Sobic006G272700--Sobic001G027800 Sobic010G253500 Sobic010G253500 Sobic006G272700--Sobic010G253500 Sobic001G210250 Sobic001G210250 Sobic006G272700--Sobic001G210250 Sobic006G272700--Sobic001G210200 Sobic001G292000 Sobic001G292000 Sobic010G046700--Sobic001G292000 Sobic003G051000 Sobic003G051000 Sobic010G046700--Sobic003G051000 Sobic010G046700--Sobic010G199900 Sobic007G164000 Sobic007G164000 Sobic010G046700--Sobic007G164000 Sobic001G110900 Sobic001G110900 Sobic010G046700--Sobic001G110900 Sobic001G057700 Sobic001G057700 Sobic010G046700--Sobic001G057700 Sobic001G312900 Sobic001G312900 Sobic010G046700--Sobic001G312900 Sobic006G264000 Sobic006G264000 Sobic010G046700--Sobic006G264000 Sobic008G140100 Sobic008G140100 Sobic010G046700--Sobic008G140100 Sobic002G207100--Sobic003G064300 Sobic002G207100--Sobic007G143200 Sobic002G207100--Sobic007G143100 Sobic009G076500 Sobic009G076500 Sobic002G207100--Sobic009G076500 Sobic002G207100--Sobic009G076700 Sobic002G207100--Sobic007G073750 Sobic002G207100--Sobic003G397400 Sobic009G167000 Sobic009G167000 Sobic002G207100--Sobic009G167000 Sobic002G207100--Sobic010G253500 Sobic003G064300--Sobic003G397400 Sobic003G064300--Sobic007G143200 Sobic003G064300--Sobic007G143100 Sobic003G064300--Sobic002G207100 Sobic003G064300--Sobic005G016900 Sobic003G064300--Sobic007G073750 Sobic003G064300--Sobic009G076700 Sobic003G064300--Sobic006G272700 Sobic009G064400 Sobic009G064400 Sobic003G064300--Sobic009G064400 Sobic007G143200--Sobic007G143100 Sobic007G143200--Sobic005G016900 Sobic007G143200--Sobic007G073750 Sobic007G143200--Sobic009G076700 Sobic007G143200--Sobic003G397400 Sobic007G143200--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic007G143200--Sobic003G083000 Sobic007G143200--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic007G143200--Sobic001G075101 Sobic009G076700--Sobic007G143100 Sobic009G076700--Sobic007G073750 Sobic009G076700--Sobic005G016900 Sobic009G076700--Sobic007G143200 Sobic009G076700--Sobic003G397400 Sobic009G076700--Sobic007G169600 Sobic009G076700--Sobic002G037400 Sobic009G076700--Sobic003G083000 Sobic009G076700--Sobic010G253500 Sobic001G210200--Sobic001G210200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.