Gene annotation
Transcriptome id Sobic.004G302300.1
Synonym RANGAP2, Sb04g033560
Functional annotation RAN GTPase-activating protein 1, putative, expressed
UniProt C5XS52
Pfam -
Panther DB PTHR24106 PTHR24106:SF156
NCBI CDD -
KEGG Orthology K14319; Ran GTPase-activating protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G63130 : RAN GTPase activating protein 1
RAP-DB (Rice) LOC_Os05g46560.1 : RAN GTPase-activating protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a031985 , Zm00025a024221 , Zm00025a021140
Brachypodium PNT66669 , KQJ98353 , KQJ98352
Barley HORVU1Hr1G063300.4 , HORVU3Hr1G090080.4 , HORVU3Hr1G090080.1 , HORVU3Hr1G090080.2 , HORVU3Hr1G090080.3 , HORVU1Hr1G063300.3 , HORVU1Hr1G063300.2 , HORVU1Hr1G063300.1 , HORVU1Hr1G063300.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393101 - -
2 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
3 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.002G204350 - -
5 Sobic.002G394900 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.005G184800 - -
7 Sobic.005G184700 - -
8 Sobic.001G122600 expressed protein -
9 Sobic.001G122600 expressed protein -
10 Sobic.001G122600 expressed protein -
11 Sobic.001G122600 expressed protein -
12 Sobic.001G122600 expressed protein -
13 Sobic.001G122600 expressed protein -
14 Sobic.001G122600 expressed protein -
15 Sobic.001G122600 expressed protein -
16 Sobic.001G122600 expressed protein -
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic004G302300 Sobic004G302300 Sobic001G393101 Sobic001G393101 Sobic004G302300--Sobic001G393101 Sobic003G443400 Sobic003G443400 Sobic004G302300--Sobic003G443400 Sobic006G217800 Sobic006G217800 Sobic004G302300--Sobic006G217800 Sobic002G204350 Sobic002G204350 Sobic004G302300--Sobic002G204350 Sobic002G394900 Sobic002G394900 Sobic004G302300--Sobic002G394900 Sobic005G184800 Sobic005G184800 Sobic004G302300--Sobic005G184800 Sobic005G184700 Sobic005G184700 Sobic004G302300--Sobic005G184700 Sobic001G122600 Sobic001G122600 Sobic004G302300--Sobic001G122600 Sobic001G393101--Sobic003G443400 Sobic001G393101--Sobic006G217800 Sobic001G393101--Sobic005G184800 Sobic008G149300 Sobic008G149300 Sobic001G393101--Sobic008G149300 Sobic001G393101--Sobic001G122600 Sobic003G443400--Sobic006G217800 Sobic003G443400--Sobic001G393101 Sobic004G349550 Sobic004G349550 Sobic003G443400--Sobic004G349550 Sobic003G443400--Sobic008G149300 Sobic009G103800 Sobic009G103800 Sobic003G443400--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic003G443400--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic003G443400--Sobic001G166900 Sobic001G344300 Sobic001G344300 Sobic003G443400--Sobic001G344300 Sobic003G443400--Sobic005G184700 Sobic006G217800--Sobic003G443400 Sobic006G217800--Sobic001G393101 Sobic006G217800--Sobic001G166900 Sobic006G217800--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic006G217800--Sobic002G184700 Sobic006G217800--Sobic009G103800 Sobic006G217800--Sobic008G149300 Sobic006G217800--Sobic001G344300 Sobic001G165600 Sobic001G165600 Sobic006G217800--Sobic001G165600 Sobic002G204350--Sobic001G122600 Sobic002G394900--Sobic001G393101 Sobic002G394900--Sobic003G443400 Sobic002G394900--Sobic006G217800 Sobic007G191500 Sobic007G191500 Sobic002G394900--Sobic007G191500 Sobic005G021000 Sobic005G021000 Sobic002G394900--Sobic005G021000 Sobic003G427000 Sobic003G427000 Sobic002G394900--Sobic003G427000 Sobic002G394900--Sobic008G149300 Sobic002G394900--Sobic002G204350 Sobic002G394900--Sobic001G122600 Sobic005G184800--Sobic001G122600 Sobic005G184700--Sobic005G184800 Sobic005G184700--Sobic001G122600 Sobic001G122600--Sobic001G122600
Octagon: transcription factors


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