Gene annotation
Transcriptome id Sobic.006G007700.1
Synonym Sb06g000800
Functional annotation CAS1 domain-containing protein 1 precursor, putative, expressed
UniProt C5YBN5
Pfam PF07779
Panther DB PTHR13533 PTHR13533:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06550 : O-acetyltransferase family protein
RAP-DB (Rice) LOC_Os05g50510.1 : CAS1 domain-containing protein 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a036720 , Zm00025a012195 , Zm00025a044723
Brachypodium -
Barley HORVU1Hr1G091870.1 , HORVU1Hr1G091870.2 , HORVU1Hr1G091870.3 , HORVU1Hr1G091870.4 , HORVU1Hr1G091870.5 , HORVU1Hr1G091870.7 , HORVU1Hr1G091870.8 , HORVU1Hr1G091870.6
Wheat TraesCS4B02G337600 , TraesCS4B02G337600 , TraesCS4D02G332900
Populus PNT23833 , PNT23834 , PNT23835 , PNT23836


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G519500 - -
2 Sobic.007G043050 - -
3 Sobic.001G369701 - -
4 Sobic.010G263151 - -
5 Sobic.010G165925 - -
6 Sobic.006G196800 OsFBX177 - F-box domain containing protein, expressed -
7 Sobic.007G003250 - -
8 Sobic.007G203600 transferase family protein, putative, expressed -
9 Sobic.003G188700 expressed protein -
10 Sobic.003G267400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G453250 - -
12 Sobic.005G148300 - -
13 Sobic.002G142550 - -
14 Sobic.005G107250 - -
15 Sobic.003G419100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSP domain containing protein, putative, expressed -
16 Sobic.001G277700 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.003G025500 ZOS8-02 - C2H2 zinc finger protein, expressed -
18 Sobic.001G209000 secretory protein, putative, expressed -
19 Sobic.003G199650 - -
20 Sobic.001G115200 - -


Gene co-expression network
sample Sobic006G007700 Sobic006G007700 Sobic001G519500 Sobic001G519500 Sobic006G007700--Sobic001G519500 Sobic007G043050 Sobic007G043050 Sobic006G007700--Sobic007G043050 Sobic001G369701 Sobic001G369701 Sobic006G007700--Sobic001G369701 Sobic010G263151 Sobic010G263151 Sobic006G007700--Sobic010G263151 Sobic010G165925 Sobic010G165925 Sobic006G007700--Sobic010G165925 Sobic006G196800 Sobic006G196800 Sobic006G007700--Sobic006G196800 Sobic007G003250 Sobic007G003250 Sobic006G007700--Sobic007G003250 Sobic007G203600 Sobic007G203600 Sobic006G007700--Sobic007G203600 Sobic003G188700 Sobic003G188700 Sobic006G007700--Sobic003G188700 Sobic001G519500--Sobic007G043050 Sobic001G519500--Sobic006G007700 Sobic001G519500--Sobic001G369701 Sobic001G519500--Sobic010G165925 Sobic001G519500--Sobic007G003250 Sobic005G107250 Sobic005G107250 Sobic001G519500--Sobic005G107250 Sobic002G142550 Sobic002G142550 Sobic001G519500--Sobic002G142550 Sobic001G115200 Sobic001G115200 Sobic001G519500--Sobic001G115200 Sobic001G519500--Sobic006G196800 Sobic007G043050--Sobic001G519500 Sobic007G043050--Sobic006G007700 Sobic007G043050--Sobic001G369701 Sobic007G043050--Sobic010G165925 Sobic007G043050--Sobic007G203600 Sobic007G043050--Sobic007G003250 Sobic007G043050--Sobic006G196800 Sobic007G043050--Sobic005G107250 Sobic007G043050--Sobic010G263151 Sobic001G369701--Sobic010G165925 Sobic001G369701--Sobic005G107250 Sobic001G369701--Sobic007G003250 Sobic001G369701--Sobic002G142550 Sobic001G369701--Sobic006G007700 Sobic001G369701--Sobic001G519500 Sobic001G369701--Sobic001G115200 Sobic001G369701--Sobic007G043050 Sobic003G025500 Sobic003G025500 Sobic001G369701--Sobic003G025500 Sobic010G263151--Sobic006G196800 Sobic003G267400 Sobic003G267400 Sobic010G263151--Sobic003G267400 Sobic010G263151--Sobic003G188700 Sobic003G419100 Sobic003G419100 Sobic010G263151--Sobic003G419100 Sobic001G209000 Sobic001G209000 Sobic010G263151--Sobic001G209000 Sobic010G263151--Sobic010G165925 Sobic010G263151--Sobic006G007700 Sobic001G355850 Sobic001G355850 Sobic010G263151--Sobic001G355850 Sobic010G263151--Sobic007G203600 Sobic010G165925--Sobic007G003250 Sobic010G165925--Sobic001G369701 Sobic010G165925--Sobic005G107250 Sobic010G165925--Sobic002G142550 Sobic010G165925--Sobic006G196800 Sobic010G165925--Sobic003G025500 Sobic010G165925--Sobic001G115200 Sobic010G180300 Sobic010G180300 Sobic010G165925--Sobic010G180300 Sobic010G165925--Sobic010G263151 Sobic006G196800--Sobic010G263151 Sobic006G196800--Sobic010G165925 Sobic006G196800--Sobic007G003250 Sobic006G196800--Sobic001G369701 Sobic006G196800--Sobic003G188700 Sobic006G196800--Sobic003G267400 Sobic006G196800--Sobic006G007700 Sobic006G196800--Sobic003G419100 Sobic006G196800--Sobic002G142550 Sobic007G003250--Sobic010G165925 Sobic007G003250--Sobic001G369701 Sobic007G003250--Sobic005G107250 Sobic007G003250--Sobic002G142550 Sobic007G003250--Sobic003G025500 Sobic007G003250--Sobic006G196800 Sobic007G003250--Sobic001G115200 Sobic007G003250--Sobic010G180300 Sobic007G003250--Sobic010G263151 Sobic007G203600--Sobic010G263151 Sobic007G203600--Sobic007G043050 Sobic007G203600--Sobic006G007700 Sobic008G157400 Sobic008G157400 Sobic007G203600--Sobic008G157400 Sobic007G203600--Sobic003G267400 Sobic007G203600--Sobic006G196800 Sobic003G008400 Sobic003G008400 Sobic007G203600--Sobic003G008400 Sobic003G254400 Sobic003G254400 Sobic007G203600--Sobic003G254400 Sobic007G203600--Sobic001G519500 Sobic003G188700--Sobic010G263151 Sobic003G188700--Sobic006G196800 Sobic003G188700--Sobic010G165925 Sobic003G188700--Sobic007G003250 Sobic003G188700--Sobic003G267400 Sobic003G188700--Sobic001G369701 Sobic003G188700--Sobic006G007700 Sobic003G188700--Sobic003G419100 Sobic003G188700--Sobic001G209000
Octagon: transcription factors


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