Gene annotation
Transcriptome id Sobic.006G023900.1
Synonym Sb06g002170, SAG12
Functional annotation vignain precursor, putative, expressed
UniProt C5YCP7
Pfam PF08246 PF00112
Panther DB PTHR12411 PTHR12411:SF348
NCBI CDD KOG1543; Cysteine proteinase Cathepsin L
KEGG Orthology K16292; CEP, KDEL-tailed cysteine endopeptidase
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G45890 : senescence-associated gene 12
RAP-DB (Rice) LOC_Os04g13090.1 : vignain precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G445850 - -
2 Sobic.001G445850 - -
3 Sobic.001G445850 - -
4 Sobic.001G445850 - -
5 Sobic.001G445850 - -
6 Sobic.001G445850 - -
7 Sobic.010G272600 expressed protein -
8 Sobic.001G382266 - -
9 Sobic.001G382266 - -
10 Sobic.001G382266 - -
11 Sobic.001G382266 - -
12 Sobic.001G382266 - -
13 Sobic.001G382266 - -
14 Sobic.001G382266 - -
15 Sobic.010G146800 expressed protein -
16 Sobic.001G293450 - -
17 Sobic.010G247500 homeobox associated leucine zipper, putative, expressed -
18 Sobic.008G062800 expressed protein -
19 Sobic.001G276700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.001G442100 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G023900 Sobic006G023900 Sobic001G445850 Sobic001G445850 Sobic006G023900--Sobic001G445850 Sobic010G272600 Sobic010G272600 Sobic006G023900--Sobic010G272600 Sobic001G382266 Sobic001G382266 Sobic006G023900--Sobic001G382266 Sobic001G445850--Sobic001G445850 Sobic007G044700 Sobic007G044700 Sobic001G445850--Sobic007G044700 Sobic005G117700 Sobic005G117700 Sobic001G445850--Sobic005G117700 Sobic006G176000 Sobic006G176000 Sobic001G445850--Sobic006G176000 Sobic005G157733 Sobic005G157733 Sobic001G445850--Sobic005G157733 Sobic008G104100 Sobic008G104100 Sobic010G272600--Sobic008G104100 Sobic007G139650 Sobic007G139650 Sobic010G272600--Sobic007G139650 Sobic005G188200 Sobic005G188200 Sobic010G272600--Sobic005G188200 Sobic002G032200 Sobic002G032200 Sobic010G272600--Sobic002G032200 Sobic007G101900 Sobic007G101900 Sobic010G272600--Sobic007G101900 Sobic002G217100 Sobic002G217100 Sobic010G272600--Sobic002G217100 Sobic009G057400 Sobic009G057400 Sobic010G272600--Sobic009G057400 Sobic001G398500 Sobic001G398500 Sobic010G272600--Sobic001G398500 Sobic010G247500 Sobic010G247500 Sobic010G272600--Sobic010G247500 Sobic001G382266--Sobic001G382266 Sobic001G276700 Sobic001G276700 Sobic001G382266--Sobic001G276700 Sobic008G059300 Sobic008G059300 Sobic001G382266--Sobic008G059300 Sobic002G144150 Sobic002G144150 Sobic001G382266--Sobic002G144150
Octagon: transcription factors


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