Gene annotation
Transcriptome id Sobic.010G146800.1
Synonym Sb10g019650
Functional annotation expressed protein
UniProt A0A194YJ99
Pfam PF04181
Panther DB PTHR14732 PTHR14732:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26760 : -
RAP-DB (Rice) LOC_Os05g04370.1 : expressed protein
MaizeGDB (Corn) Zm00025a038145
Brachypodium KQK07963
Barley HORVU1Hr1G016630.7 , HORVU1Hr1G016630.5 , HORVU1Hr1G016630.3 , HORVU1Hr1G016630.9 , HORVU1Hr1G016630.8
Wheat TraesCS1D02G079700 , TraesCS1B02G095700 , TraesCS1A02G077600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G027232 - -
2 Sobic.006G176000 expressed protein -
3 Sobic.005G157733 - -
4 Sobic.001G445850 - -
5 Sobic.001G445850 - -
6 Sobic.001G445850 - -
7 Sobic.001G445850 - -
8 Sobic.001G445850 - -
9 Sobic.001G445850 - -
10 Sobic.006G037900 - -
11 Sobic.005G117700 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.004G284001 - -
13 Sobic.003G232001 - -
14 Sobic.005G077200 - -
15 Sobic.001G186300 sec20 domain containing protein, expressed K08497: protein transport protein SEC20
16 Sobic.010G145650 - -
17 Sobic.005G138150 - -
18 Sobic.004G003600 - -
19 Sobic.005G067850 - -
20 Sobic.008G029200 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY104, expressed -


Gene co-expression network
sample Sobic010G146800 Sobic010G146800 Sobic002G027232 Sobic002G027232 Sobic010G146800--Sobic002G027232 Sobic006G176000 Sobic006G176000 Sobic010G146800--Sobic006G176000 Sobic005G157733 Sobic005G157733 Sobic010G146800--Sobic005G157733 Sobic001G445850 Sobic001G445850 Sobic010G146800--Sobic001G445850 Sobic002G027232--Sobic006G176000 Sobic005G081900 Sobic005G081900 Sobic002G027232--Sobic005G081900 Sobic003G180600 Sobic003G180600 Sobic002G027232--Sobic003G180600 Sobic006G222000 Sobic006G222000 Sobic002G027232--Sobic006G222000 Sobic005G077200 Sobic005G077200 Sobic002G027232--Sobic005G077200 Sobic006G037900 Sobic006G037900 Sobic002G027232--Sobic006G037900 Sobic008G029200 Sobic008G029200 Sobic002G027232--Sobic008G029200 Sobic010G060800 Sobic010G060800 Sobic002G027232--Sobic010G060800 Sobic002G027232--Sobic005G157733 Sobic006G176000--Sobic002G027232 Sobic007G005900 Sobic007G005900 Sobic006G176000--Sobic007G005900 Sobic007G044700 Sobic007G044700 Sobic006G176000--Sobic007G044700 Sobic006G176000--Sobic001G445850 Sobic010G145650 Sobic010G145650 Sobic005G157733--Sobic010G145650 Sobic005G117700 Sobic005G117700 Sobic005G157733--Sobic005G117700 Sobic005G157733--Sobic001G445850 Sobic002G162450 Sobic002G162450 Sobic005G157733--Sobic002G162450 Sobic001G445850--Sobic001G445850 Sobic001G445850--Sobic007G044700 Sobic001G445850--Sobic005G117700 Sobic001G445850--Sobic006G176000 Sobic001G445850--Sobic005G157733
Octagon: transcription factors


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