Gene annotation
Transcriptome id Sobic.005G117700.1
Synonym AtENODL18, Sb05g017135, ENODL18
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt A0A1B6PRV5
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT1G08500 : early nodulin-like protein 18
RAP-DB (Rice) LOC_Os11g29910.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT63633
Barley HORVU4Hr1G061950.1 , HORVU4Hr1G061950.2
Wheat TraesCS4D02G218600 , TraesCS4B02G218400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G157733 - -
2 Sobic.001G445850 - -
3 Sobic.001G445850 - -
4 Sobic.001G445850 - -
5 Sobic.001G445850 - -
6 Sobic.001G445850 - -
7 Sobic.001G445850 - -
8 Sobic.007G098900 - -
9 Sobic.005G067850 - -
10 Sobic.006G176000 expressed protein -
11 Sobic.010G146800 expressed protein -
12 Sobic.002G027232 - -
13 Sobic.010G145650 - -
14 Sobic.007G044700 speckle-type POZ protein B, putative, expressed -
15 Sobic.008G137400 - -
16 Sobic.004G086150 - -
17 Sobic.003G426700 expressed protein -
18 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
19 Sobic.006G055501 - -
20 Sobic.003G132050 - -


Gene co-expression network
sample Sobic005G117700 Sobic005G117700 Sobic005G157733 Sobic005G157733 Sobic005G117700--Sobic005G157733 Sobic001G445850 Sobic001G445850 Sobic005G117700--Sobic001G445850 Sobic007G098900 Sobic007G098900 Sobic005G117700--Sobic007G098900 Sobic005G067850 Sobic005G067850 Sobic005G117700--Sobic005G067850 Sobic010G145650 Sobic010G145650 Sobic005G157733--Sobic010G145650 Sobic005G157733--Sobic005G117700 Sobic005G157733--Sobic001G445850 Sobic002G162450 Sobic002G162450 Sobic005G157733--Sobic002G162450 Sobic001G445850--Sobic001G445850 Sobic007G044700 Sobic007G044700 Sobic001G445850--Sobic007G044700 Sobic001G445850--Sobic005G117700 Sobic006G176000 Sobic006G176000 Sobic001G445850--Sobic006G176000 Sobic001G445850--Sobic005G157733 Sobic007G098900--Sobic001G445850 Sobic007G098900--Sobic005G117700 Sobic007G098900--Sobic005G067850 Sobic007G098900--Sobic005G157733 Sobic005G067850--Sobic005G157733 Sobic005G067850--Sobic005G117700 Sobic001G266700 Sobic001G266700 Sobic005G067850--Sobic001G266700 Sobic005G067850--Sobic010G145650 Sobic005G067850--Sobic007G098900 Sobic002G027232 Sobic002G027232 Sobic005G067850--Sobic002G027232 Sobic002G321800 Sobic002G321800 Sobic005G067850--Sobic002G321800 Sobic008G010000 Sobic008G010000 Sobic005G067850--Sobic008G010000 Sobic003G435900 Sobic003G435900 Sobic005G067850--Sobic003G435900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.