Gene annotation
Transcriptome id Sobic.006G055501.3,Sobic.006G055501.4,Sobic.006G055501.2,Sobic.006G055501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RDA0 , A0A1Z5RCF3 , A0A1Z5RCD4 , A0A1Z5RCD6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
2 Sobic.004G032400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-aspartate oxidase 1, putative, expressed K00278: L-aspartate oxidase
3 Sobic.006G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclin, putative, expressed -
4 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
5 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
6 Sobic.003G009700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.002G385700 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
8 Sobic.002G401900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
10 Sobic.007G189600 - -
11 Sobic.002G359600 GA22009-PA, putative, expressed -
12 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
13 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
14 Sobic.007G152600 cytochrome P450, putative, expressed -
15 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
16 Sobic.003G256700 expressed protein -
17 Sobic.001G134800 integral membrane HPP family protein, putative, expressed -
18 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
19 Sobic.005G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
20 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic006G055501 Sobic006G055501 Sobic008G117000 Sobic008G117000 Sobic006G055501--Sobic008G117000 Sobic004G032400 Sobic004G032400 Sobic006G055501--Sobic004G032400 Sobic006G225200 Sobic006G225200 Sobic006G055501--Sobic006G225200 Sobic003G003600 Sobic003G003600 Sobic006G055501--Sobic003G003600 Sobic001G073900 Sobic001G073900 Sobic006G055501--Sobic001G073900 Sobic003G009700 Sobic003G009700 Sobic006G055501--Sobic003G009700 Sobic002G385700 Sobic002G385700 Sobic006G055501--Sobic002G385700 Sobic002G401900 Sobic002G401900 Sobic006G055501--Sobic002G401900 Sobic003G332700 Sobic003G332700 Sobic006G055501--Sobic003G332700 Sobic002G324500 Sobic002G324500 Sobic008G117000--Sobic002G324500 Sobic008G117000--Sobic001G073900 Sobic003G036200 Sobic003G036200 Sobic008G117000--Sobic003G036200 Sobic001G134100 Sobic001G134100 Sobic008G117000--Sobic001G134100 Sobic004G215800 Sobic004G215800 Sobic008G117000--Sobic004G215800 Sobic003G367500 Sobic003G367500 Sobic008G117000--Sobic003G367500 Sobic007G105500 Sobic007G105500 Sobic008G117000--Sobic007G105500 Sobic008G117000--Sobic003G332700 Sobic003G185900 Sobic003G185900 Sobic008G117000--Sobic003G185900 Sobic008G140200 Sobic008G140200 Sobic004G032400--Sobic008G140200 Sobic009G048900 Sobic009G048900 Sobic004G032400--Sobic009G048900 Sobic006G244000 Sobic006G244000 Sobic004G032400--Sobic006G244000 Sobic005G231500 Sobic005G231500 Sobic004G032400--Sobic005G231500 Sobic005G206300 Sobic005G206300 Sobic004G032400--Sobic005G206300 Sobic004G032400--Sobic008G117000 Sobic004G032400--Sobic001G134100 Sobic004G112100 Sobic004G112100 Sobic004G032400--Sobic004G112100 Sobic010G085100 Sobic010G085100 Sobic004G032400--Sobic010G085100 Sobic001G118100 Sobic001G118100 Sobic006G225200--Sobic001G118100 Sobic006G225200--Sobic003G009700 Sobic001G484800 Sobic001G484800 Sobic006G225200--Sobic001G484800 Sobic006G173000 Sobic006G173000 Sobic006G225200--Sobic006G173000 Sobic006G225200--Sobic002G385700 Sobic002G291700 Sobic002G291700 Sobic006G225200--Sobic002G291700 Sobic003G004200 Sobic003G004200 Sobic006G225200--Sobic003G004200 Sobic001G233400 Sobic001G233400 Sobic006G225200--Sobic001G233400 Sobic007G173200 Sobic007G173200 Sobic006G225200--Sobic007G173200 Sobic001G065600 Sobic001G065600 Sobic003G003600--Sobic001G065600 Sobic003G003600--Sobic001G073900 Sobic003G442700 Sobic003G442700 Sobic003G003600--Sobic003G442700 Sobic004G001300 Sobic004G001300 Sobic003G003600--Sobic004G001300 Sobic001G418700 Sobic001G418700 Sobic003G003600--Sobic001G418700 Sobic003G161000 Sobic003G161000 Sobic003G003600--Sobic003G161000 Sobic008G001000 Sobic008G001000 Sobic003G003600--Sobic008G001000 Sobic001G158900 Sobic001G158900 Sobic003G003600--Sobic001G158900 Sobic003G003600--Sobic002G385700 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600 Sobic003G009700--Sobic006G225200 Sobic003G009700--Sobic003G004200 Sobic009G249600 Sobic009G249600 Sobic003G009700--Sobic009G249600 Sobic002G273300 Sobic002G273300 Sobic003G009700--Sobic002G273300 Sobic004G327700 Sobic004G327700 Sobic003G009700--Sobic004G327700 Sobic005G045000 Sobic005G045000 Sobic003G009700--Sobic005G045000 Sobic003G009700--Sobic001G484800 Sobic001G239500 Sobic001G239500 Sobic003G009700--Sobic001G239500 Sobic001G207700 Sobic001G207700 Sobic003G009700--Sobic001G207700 Sobic002G385700--Sobic001G233400 Sobic001G536800 Sobic001G536800 Sobic002G385700--Sobic001G536800 Sobic003G137100 Sobic003G137100 Sobic002G385700--Sobic003G137100 Sobic001G069000 Sobic001G069000 Sobic002G385700--Sobic001G069000 Sobic002G385700--Sobic006G225200 Sobic006G103400 Sobic006G103400 Sobic002G385700--Sobic006G103400 Sobic010G096300 Sobic010G096300 Sobic002G385700--Sobic010G096300 Sobic002G385700--Sobic003G003600 Sobic002G385700--Sobic004G327700 Sobic003G349200 Sobic003G349200 Sobic002G401900--Sobic003G349200 Sobic008G033200 Sobic008G033200 Sobic002G401900--Sobic008G033200 Sobic002G401900--Sobic003G342100 Sobic002G401900--Sobic001G073900 Sobic003G372400 Sobic003G372400 Sobic002G401900--Sobic003G372400 Sobic002G401900--Sobic003G036200 Sobic002G403600 Sobic002G403600 Sobic002G401900--Sobic002G403600 Sobic002G401900--Sobic005G231500 Sobic006G130000 Sobic006G130000 Sobic002G401900--Sobic006G130000 Sobic003G332700--Sobic001G073900 Sobic003G332700--Sobic008G001900 Sobic003G332700--Sobic008G117000 Sobic001G530900 Sobic001G530900 Sobic003G332700--Sobic001G530900 Sobic003G332700--Sobic004G235600 Sobic003G332700--Sobic001G531500 Sobic003G332700--Sobic003G442700 Sobic003G332700--Sobic010G085100 Sobic005G118400 Sobic005G118400 Sobic003G332700--Sobic005G118400
Octagon: transcription factors


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