Gene annotation
Transcriptome id Sobic.007G189600.2,Sobic.007G189600.1
Synonym
Functional annotation -
UniProt C5YHN7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G256700 expressed protein -
2 Sobic.003G266500 Phosphoethanolamine N-methyltransferase XPL1 (At)(PubMedID : 27208977)@CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
3 Sobic.008G026800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
4 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
5 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
6 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
7 Sobic.006G093000 methyltransferase domain containing protein, expressed -
8 Sobic.009G137300 - -
9 Sobic.007G189700 - -
10 Sobic.004G097000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@F-box family protein, putative, expressed -
11 Sobic.008G016250 - -
12 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
13 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
14 Sobic.004G035601 - -
15 Sobic.004G035750 - -
16 Sobic.006G055501 - -
17 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.001G439200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
19 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
20 Sobic.004G032400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-aspartate oxidase 1, putative, expressed K00278: L-aspartate oxidase


Gene co-expression network
sample Sobic007G189600 Sobic007G189600 Sobic003G256700 Sobic003G256700 Sobic007G189600--Sobic003G256700 Sobic003G266500 Sobic003G266500 Sobic007G189600--Sobic003G266500 Sobic008G026800 Sobic008G026800 Sobic007G189600--Sobic008G026800 Sobic006G244000 Sobic006G244000 Sobic007G189600--Sobic006G244000 Sobic002G324500 Sobic002G324500 Sobic007G189600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic007G189600--Sobic003G431900 Sobic006G093000 Sobic006G093000 Sobic007G189600--Sobic006G093000 Sobic009G137300 Sobic009G137300 Sobic007G189600--Sobic009G137300 Sobic007G189700 Sobic007G189700 Sobic007G189600--Sobic007G189700 Sobic003G256700--Sobic003G431900 Sobic003G256700--Sobic006G244000 Sobic003G256700--Sobic002G324500 Sobic004G125700 Sobic004G125700 Sobic003G256700--Sobic004G125700 Sobic009G104800 Sobic009G104800 Sobic003G256700--Sobic009G104800 Sobic008G053200 Sobic008G053200 Sobic003G256700--Sobic008G053200 Sobic002G036000 Sobic002G036000 Sobic003G256700--Sobic002G036000 Sobic001G329400 Sobic001G329400 Sobic003G256700--Sobic001G329400 Sobic003G234200 Sobic003G234200 Sobic003G256700--Sobic003G234200 Sobic001G439200 Sobic001G439200 Sobic003G266500--Sobic001G439200 Sobic003G266500--Sobic002G324500 Sobic004G073500 Sobic004G073500 Sobic003G266500--Sobic004G073500 Sobic003G266500--Sobic003G256700 Sobic003G266500--Sobic006G244000 Sobic003G266500--Sobic003G234200 Sobic003G266500--Sobic004G125700 Sobic004G317500 Sobic004G317500 Sobic003G266500--Sobic004G317500 Sobic003G266500--Sobic009G104800 Sobic001G463200 Sobic001G463200 Sobic008G026800--Sobic001G463200 Sobic006G147300 Sobic006G147300 Sobic008G026800--Sobic006G147300 Sobic001G317400 Sobic001G317400 Sobic008G026800--Sobic001G317400 Sobic008G026800--Sobic002G036000 Sobic008G026800--Sobic008G053200 Sobic008G026800--Sobic003G431900 Sobic007G207800 Sobic007G207800 Sobic008G026800--Sobic007G207800 Sobic003G199800 Sobic003G199800 Sobic008G026800--Sobic003G199800 Sobic004G272600 Sobic004G272600 Sobic008G026800--Sobic004G272600 Sobic006G244000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic006G244000--Sobic009G048900 Sobic006G244000--Sobic003G256700 Sobic006G244000--Sobic009G104800 Sobic008G104601 Sobic008G104601 Sobic006G244000--Sobic008G104601 Sobic006G244000--Sobic004G125700 Sobic006G244000--Sobic003G431900 Sobic001G406000 Sobic001G406000 Sobic006G244000--Sobic001G406000 Sobic001G134100 Sobic001G134100 Sobic006G244000--Sobic001G134100 Sobic003G367500 Sobic003G367500 Sobic002G324500--Sobic003G367500 Sobic002G324500--Sobic003G234200 Sobic008G117000 Sobic008G117000 Sobic002G324500--Sobic008G117000 Sobic002G324500--Sobic003G431900 Sobic004G215800 Sobic004G215800 Sobic002G324500--Sobic004G215800 Sobic002G324500--Sobic003G256700 Sobic007G009200 Sobic007G009200 Sobic002G324500--Sobic007G009200 Sobic003G024300 Sobic003G024300 Sobic002G324500--Sobic003G024300 Sobic005G089600 Sobic005G089600 Sobic002G324500--Sobic005G089600 Sobic003G431900--Sobic008G053200 Sobic003G431900--Sobic003G234200 Sobic004G305800 Sobic004G305800 Sobic003G431900--Sobic004G305800 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic005G165500 Sobic005G165500 Sobic003G431900--Sobic005G165500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431900--Sobic004G272100 Sobic006G093000--Sobic007G189600 Sobic003G163700 Sobic003G163700 Sobic006G093000--Sobic003G163700 Sobic002G132900 Sobic002G132900 Sobic006G093000--Sobic002G132900 Sobic005G111200 Sobic005G111200 Sobic006G093000--Sobic005G111200 Sobic006G093000--Sobic001G463200 Sobic007G090475 Sobic007G090475 Sobic006G093000--Sobic007G090475 Sobic007G080780 Sobic007G080780 Sobic006G093000--Sobic007G080780 Sobic001G158900 Sobic001G158900 Sobic006G093000--Sobic001G158900 Sobic010G161201 Sobic010G161201 Sobic006G093000--Sobic010G161201 Sobic009G137300--Sobic007G189600 Sobic001G536901 Sobic001G536901 Sobic009G137300--Sobic001G536901 Sobic009G137300--Sobic003G256700 Sobic010G162500 Sobic010G162500 Sobic009G137300--Sobic010G162500 Sobic009G137300--Sobic002G324500 Sobic001G252401 Sobic001G252401 Sobic009G137300--Sobic001G252401 Sobic008G047100 Sobic008G047100 Sobic009G137300--Sobic008G047100 Sobic005G101300 Sobic005G101300 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic010G183100 Sobic010G183100 Sobic007G189700--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic009G222200 Sobic009G222200 Sobic007G189700--Sobic009G222200 Sobic009G254600 Sobic009G254600 Sobic007G189700--Sobic009G254600 Sobic002G040100 Sobic002G040100 Sobic007G189700--Sobic002G040100 Sobic007G189700--Sobic001G406000
Octagon: transcription factors


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