Gene annotation
Transcriptome id Sobic.006G093000.1
Synonym Sb06g017790
Functional annotation methyltransferase domain containing protein, expressed
UniProt C5Y973
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF881
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G01240 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os04g36710.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011238 , Zm00025a026507
Brachypodium PNT61173
Barley HORVU2Hr1G077530.2 , HORVU2Hr1G077530.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G189600 - -
2 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.002G132900 - -
4 Sobic.005G111200 PB1 domain containing protein, expressed -
5 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.007G090475 - -
7 Sobic.007G080780 - -
8 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
9 Sobic.010G161201 - -
10 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
11 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
13 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
14 Sobic.010G107400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
15 Sobic.006G014900 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.006G055501 - -
17 Sobic.006G051300 expressed protein -
18 Sobic.005G099700 expressed protein -
19 Sobic.002G064000 expressed protein -
20 Sobic.009G171300 PX domain containing protein, expressed -


Gene co-expression network
sample Sobic006G093000 Sobic006G093000 Sobic007G189600 Sobic007G189600 Sobic006G093000--Sobic007G189600 Sobic003G163700 Sobic003G163700 Sobic006G093000--Sobic003G163700 Sobic002G132900 Sobic002G132900 Sobic006G093000--Sobic002G132900 Sobic005G111200 Sobic005G111200 Sobic006G093000--Sobic005G111200 Sobic001G463200 Sobic001G463200 Sobic006G093000--Sobic001G463200 Sobic007G090475 Sobic007G090475 Sobic006G093000--Sobic007G090475 Sobic007G080780 Sobic007G080780 Sobic006G093000--Sobic007G080780 Sobic001G158900 Sobic001G158900 Sobic006G093000--Sobic001G158900 Sobic010G161201 Sobic010G161201 Sobic006G093000--Sobic010G161201 Sobic003G256700 Sobic003G256700 Sobic007G189600--Sobic003G256700 Sobic003G266500 Sobic003G266500 Sobic007G189600--Sobic003G266500 Sobic008G026800 Sobic008G026800 Sobic007G189600--Sobic008G026800 Sobic006G244000 Sobic006G244000 Sobic007G189600--Sobic006G244000 Sobic002G324500 Sobic002G324500 Sobic007G189600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic007G189600--Sobic003G431900 Sobic007G189600--Sobic006G093000 Sobic009G137300 Sobic009G137300 Sobic007G189600--Sobic009G137300 Sobic007G189700 Sobic007G189700 Sobic007G189600--Sobic007G189700 Sobic005G099700 Sobic005G099700 Sobic003G163700--Sobic005G099700 Sobic001G435500 Sobic001G435500 Sobic003G163700--Sobic001G435500 Sobic003G163700--Sobic005G111200 Sobic008G117300 Sobic008G117300 Sobic003G163700--Sobic008G117300 Sobic008G015100 Sobic008G015100 Sobic003G163700--Sobic008G015100 Sobic009G171300 Sobic009G171300 Sobic003G163700--Sobic009G171300 Sobic004G272600 Sobic004G272600 Sobic003G163700--Sobic004G272600 Sobic001G066600 Sobic001G066600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic002G132900--Sobic007G090475 Sobic001G274600 Sobic001G274600 Sobic002G132900--Sobic001G274600 Sobic002G201200 Sobic002G201200 Sobic002G132900--Sobic002G201200 Sobic002G082950 Sobic002G082950 Sobic002G132900--Sobic002G082950 Sobic004G071800 Sobic004G071800 Sobic002G132900--Sobic004G071800 Sobic005G042100 Sobic005G042100 Sobic002G132900--Sobic005G042100 Sobic002G132900--Sobic004G272600 Sobic005G152600 Sobic005G152600 Sobic002G132900--Sobic005G152600 Sobic010G108401 Sobic010G108401 Sobic002G132900--Sobic010G108401 Sobic005G111200--Sobic003G163700 Sobic005G111200--Sobic008G015100 Sobic005G111200--Sobic001G463200 Sobic005G111200--Sobic004G272600 Sobic010G164200 Sobic010G164200 Sobic005G111200--Sobic010G164200 Sobic005G111200--Sobic009G171300 Sobic008G016250 Sobic008G016250 Sobic005G111200--Sobic008G016250 Sobic001G425400 Sobic001G425400 Sobic005G111200--Sobic001G425400 Sobic005G111200--Sobic005G099700 Sobic001G463200--Sobic004G272600 Sobic001G463200--Sobic008G026800 Sobic004G035601 Sobic004G035601 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic006G147300 Sobic006G147300 Sobic001G463200--Sobic006G147300 Sobic006G051300 Sobic006G051300 Sobic001G463200--Sobic006G051300 Sobic001G463200--Sobic005G111200 Sobic001G463200--Sobic008G015100 Sobic008G053200 Sobic008G053200 Sobic001G463200--Sobic008G053200 Sobic007G090475--Sobic002G132900 Sobic010G128000 Sobic010G128000 Sobic007G090475--Sobic010G128000 Sobic007G090475--Sobic001G435500 Sobic007G090475--Sobic003G163700 Sobic007G090475--Sobic001G066600 Sobic001G260850 Sobic001G260850 Sobic007G090475--Sobic001G260850 Sobic007G090475--Sobic002G082950 Sobic009G229700 Sobic009G229700 Sobic007G090475--Sobic009G229700 Sobic008G002700 Sobic008G002700 Sobic007G090475--Sobic008G002700 Sobic001G252401 Sobic001G252401 Sobic007G080780--Sobic001G252401 Sobic001G071200 Sobic001G071200 Sobic007G080780--Sobic001G071200 Sobic003G284800 Sobic003G284800 Sobic007G080780--Sobic003G284800 Sobic003G255900 Sobic003G255900 Sobic007G080780--Sobic003G255900 Sobic004G099700 Sobic004G099700 Sobic007G080780--Sobic004G099700 Sobic006G014900 Sobic006G014900 Sobic007G080780--Sobic006G014900 Sobic010G006300 Sobic010G006300 Sobic007G080780--Sobic010G006300 Sobic006G123500 Sobic006G123500 Sobic007G080780--Sobic006G123500 Sobic007G080780--Sobic006G093000 Sobic001G065600 Sobic001G065600 Sobic001G158900--Sobic001G065600 Sobic002G036000 Sobic002G036000 Sobic001G158900--Sobic002G036000 Sobic005G188600 Sobic005G188600 Sobic001G158900--Sobic005G188600 Sobic001G003200 Sobic001G003200 Sobic001G158900--Sobic001G003200 Sobic006G188000 Sobic006G188000 Sobic001G158900--Sobic006G188000 Sobic006G010900 Sobic006G010900 Sobic001G158900--Sobic006G010900 Sobic008G117000 Sobic008G117000 Sobic001G158900--Sobic008G117000 Sobic005G101300 Sobic005G101300 Sobic001G158900--Sobic005G101300 Sobic002G403600 Sobic002G403600 Sobic001G158900--Sobic002G403600 Sobic008G054100 Sobic008G054100 Sobic010G161201--Sobic008G054100 Sobic007G048200 Sobic007G048200 Sobic010G161201--Sobic007G048200 Sobic009G202400 Sobic009G202400 Sobic010G161201--Sobic009G202400 Sobic005G192600 Sobic005G192600 Sobic010G161201--Sobic005G192600 Sobic010G161201--Sobic006G014900 Sobic010G172300 Sobic010G172300 Sobic010G161201--Sobic010G172300 Sobic001G198700 Sobic001G198700 Sobic010G161201--Sobic001G198700 Sobic010G225600 Sobic010G225600 Sobic010G161201--Sobic010G225600 Sobic005G231600 Sobic005G231600 Sobic010G161201--Sobic005G231600
Octagon: transcription factors


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