Gene annotation
Transcriptome id Sobic.010G162500.1
Synonym Sb10g021670
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
reticuline oxidase-like protein precursor, putative, expressed
UniProt A0A194YJL9
Pfam PF08031 PF01565
Panther DB PTHR32448 PTHR32448:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G20820 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35560.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a042344 , Zm00025a020032
Brachypodium KQK18048 , KQK18047
Barley HORVU2Hr1G122590.1 , HORVU7Hr1G089280.1 , HORVU2Hr1G000530.1 , HORVU7Hr1G089270.1
Wheat TraesCS7D02G369100 , TraesCS2B02G017300 , TraesCS7D02G369200
Populus -


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cDNA sequences
Sobic.010G162500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G006300 homeobox domain containing protein, expressed -
2 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
3 Sobic.001G176700 CBS domain containing protein, expressed -
4 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
5 Sobic.007G141300 - -
6 Sobic.001G252401 - -
7 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
8 Sobic.003G097701 - -
9 Sobic.010G263500 expressed protein -
10 Sobic.004G289300 expressed protein -
11 Sobic.004G197700 expressed protein -
12 Sobic.006G122500 methyltransferase domain containing protein, expressed -
13 Sobic.009G137300 - -
14 Sobic.001G276400 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
15 Sobic.004G095800 - -
16 Sobic.001G095900 - -
17 Sobic.003G154200 serine carboxypeptidase, putative, expressed K16297: serine carboxypeptidase-like clade II
18 Sobic.009G069450 - -
19 Sobic.001G445600 DNA polymerase I, putative, expressed -
20 Sobic.006G093000 methyltransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G162500 Sobic010G162500 Sobic010G006300 Sobic010G006300 Sobic010G162500--Sobic010G006300 Sobic007G028200 Sobic007G028200 Sobic010G162500--Sobic007G028200 Sobic001G176700 Sobic001G176700 Sobic010G162500--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic001G252401 Sobic001G252401 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic003G097701 Sobic003G097701 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic003G403800 Sobic003G403800 Sobic010G006300--Sobic003G403800 Sobic006G122500 Sobic006G122500 Sobic010G006300--Sobic006G122500 Sobic007G080780 Sobic007G080780 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic001G176700--Sobic007G028200 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic007G141300--Sobic007G028200 Sobic007G141300--Sobic003G097701 Sobic007G141300--Sobic005G166900 Sobic007G141300--Sobic002G025000 Sobic007G141650 Sobic007G141650 Sobic007G141300--Sobic007G141650 Sobic010G225400 Sobic010G225400 Sobic007G141300--Sobic010G225400 Sobic001G011600 Sobic001G011600 Sobic007G141300--Sobic001G011600 Sobic005G096450 Sobic005G096450 Sobic007G141300--Sobic005G096450 Sobic010G107901 Sobic010G107901 Sobic007G141300--Sobic010G107901 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic001G252401--Sobic003G403800 Sobic001G252401--Sobic003G285600 Sobic001G252401--Sobic007G080780 Sobic001G252401--Sobic010G162500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic010G162200--Sobic004G197700 Sobic003G097701--Sobic005G166900 Sobic005G167100 Sobic005G167100 Sobic003G097701--Sobic005G167100 Sobic001G054050 Sobic001G054050 Sobic003G097701--Sobic001G054050 Sobic010G107601 Sobic010G107601 Sobic003G097701--Sobic010G107601 Sobic003G097701--Sobic002G025000 Sobic003G172400 Sobic003G172400 Sobic003G097701--Sobic003G172400 Sobic003G097701--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic003G097701--Sobic008G140050 Sobic003G097701--Sobic007G141650 Sobic010G263500--Sobic010G162500 Sobic010G263500--Sobic007G141300 Sobic001G445600 Sobic001G445600 Sobic010G263500--Sobic001G445600 Sobic010G263500--Sobic007G028200 Sobic010G263500--Sobic010G006300 Sobic009G137300 Sobic009G137300 Sobic010G263500--Sobic009G137300 Sobic010G263500--Sobic003G097701 Sobic001G134900 Sobic001G134900 Sobic010G263500--Sobic001G134900 Sobic001G095900 Sobic001G095900 Sobic010G263500--Sobic001G095900
Octagon: transcription factors


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