Gene annotation
Transcriptome id Sobic.003G285600.1
Synonym Sb03g033650
Functional annotation peroxisomal membrane protein, putative, expressed
UniProt C5XJ24
Pfam PF04117
Panther DB PTHR11266 PTHR11266:SF37
NCBI CDD KOG1944; Peroxisomal membrane protein MPV17 and related proteins
KEGG Orthology K13348; protein Mpv17
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G42770 : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
RAP-DB (Rice) LOC_Os01g53060.1 : peroxisomal membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a039017
Brachypodium KQK09587 , KQK09589 , KQK09588
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G285600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
2 Sobic.001G176700 CBS domain containing protein, expressed -
3 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
4 Sobic.001G252401 - -
5 Sobic.010G006300 homeobox domain containing protein, expressed -
6 Sobic.003G050000 thiol-disulphide oxidoreductase DCC, putative, expressed -
7 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
9 Sobic.003G097701 - -
10 Sobic.001G193800 - -
11 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
12 Sobic.006G122500 methyltransferase domain containing protein, expressed -
13 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
14 Sobic.002G085400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase, putative, expressed -
15 Sobic.001G383400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.001G445600 DNA polymerase I, putative, expressed -
17 Sobic.004G197700 expressed protein -
18 Sobic.007G004750 - -
19 Sobic.009G069450 - -
20 Sobic.007G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic003G285600 Sobic003G285600 Sobic010G162200 Sobic010G162200 Sobic003G285600--Sobic010G162200 Sobic001G176700 Sobic001G176700 Sobic003G285600--Sobic001G176700 Sobic010G162500 Sobic010G162500 Sobic003G285600--Sobic010G162500 Sobic001G252401 Sobic001G252401 Sobic003G285600--Sobic001G252401 Sobic010G006300 Sobic010G006300 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G403800 Sobic003G403800 Sobic003G285600--Sobic003G403800 Sobic007G028200 Sobic007G028200 Sobic003G285600--Sobic007G028200 Sobic003G097701 Sobic003G097701 Sobic003G285600--Sobic003G097701 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic004G197700 Sobic004G197700 Sobic010G162200--Sobic004G197700 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic001G176700--Sobic007G028200 Sobic001G176700--Sobic010G162500 Sobic001G176700--Sobic004G197700 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic001G252401--Sobic010G006300 Sobic001G536901 Sobic001G536901 Sobic001G252401--Sobic001G536901 Sobic001G252401--Sobic003G403800 Sobic001G252401--Sobic003G285600 Sobic007G080780 Sobic007G080780 Sobic001G252401--Sobic007G080780 Sobic001G252401--Sobic010G162500 Sobic006G122500 Sobic006G122500 Sobic001G252401--Sobic006G122500 Sobic008G193200 Sobic008G193200 Sobic001G252401--Sobic008G193200 Sobic005G101300 Sobic005G101300 Sobic001G252401--Sobic005G101300 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic010G006300--Sobic003G403800 Sobic010G006300--Sobic006G122500 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic006G177400 Sobic006G177400 Sobic003G050000--Sobic006G177400 Sobic003G050000--Sobic003G403800 Sobic003G050000--Sobic003G285600 Sobic001G018000 Sobic001G018000 Sobic003G050000--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic003G050000--Sobic004G268400 Sobic007G016600 Sobic007G016600 Sobic003G050000--Sobic007G016600 Sobic001G411100 Sobic001G411100 Sobic003G050000--Sobic001G411100 Sobic001G434000 Sobic001G434000 Sobic003G050000--Sobic001G434000 Sobic004G165700 Sobic004G165700 Sobic003G050000--Sobic004G165700 Sobic006G063900 Sobic006G063900 Sobic003G403800--Sobic006G063900 Sobic003G403800--Sobic001G252401 Sobic010G201600 Sobic010G201600 Sobic003G403800--Sobic010G201600 Sobic001G167900 Sobic001G167900 Sobic003G403800--Sobic001G167900 Sobic003G403800--Sobic003G050000 Sobic002G061900 Sobic002G061900 Sobic003G403800--Sobic002G061900 Sobic004G359600 Sobic004G359600 Sobic003G403800--Sobic004G359600 Sobic004G124400 Sobic004G124400 Sobic003G403800--Sobic004G124400 Sobic003G403800--Sobic001G176700 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic003G097701--Sobic005G166900 Sobic005G167100 Sobic005G167100 Sobic003G097701--Sobic005G167100 Sobic001G054050 Sobic001G054050 Sobic003G097701--Sobic001G054050 Sobic010G107601 Sobic010G107601 Sobic003G097701--Sobic010G107601 Sobic003G097701--Sobic002G025000 Sobic003G172400 Sobic003G172400 Sobic003G097701--Sobic003G172400 Sobic010G225400 Sobic010G225400 Sobic003G097701--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic003G097701--Sobic008G140050 Sobic007G141650 Sobic007G141650 Sobic003G097701--Sobic007G141650
Octagon: transcription factors


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