Gene annotation
Transcriptome id Sobic.001G374400.2,Sobic.001G374400.1
Synonym Sb01g035560
Functional annotation Heavy metal transport/detoxification superfamily protein (PubMedID : 26465154)
heavy metal-associated domain containing protein, expressed
UniProt A0A1B6QNA0 , A0A1B6QNB6
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF146
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03380 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os03g22490.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052391 , Zm00025a002416
Brachypodium KQK21725 , KQK21724
Barley HORVU7Hr1G118340.1 , HORVU7Hr1G118340.2 , HORVU7Hr1G118340.3 , HORVU7Hr1G118340.4 , HORVU7Hr1G118340.5 , HORVU7Hr1G118340.6 , HORVU7Hr1G118340.7 , HORVU7Hr1G118340.8 , HORVU4Hr1G046610.1 , HORVU4Hr1G046610.2
Wheat TraesCS5A02G030900 , TraesCS5A02G030900 , TraesCS7B02G462300 , TraesCS5D02G039100 , TraesCS5D02G039100 , TraesCS5B02G030300
Populus -


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cDNA sequences
Sobic.001G374400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G193200 expressed protein -
2 Sobic.002G324700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
3 Sobic.001G176700 CBS domain containing protein, expressed -
4 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
5 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
6 Sobic.002G085400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase, putative, expressed -
7 Sobic.009G049000 - -
8 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
9 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
10 Sobic.008G061300 - -
11 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
12 Sobic.006G168500 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.008G047100 tetratricopeptide-like helical, putative, expressed -
14 Sobic.004G165700 expressed protein -
15 Sobic.010G006300 homeobox domain containing protein, expressed -
16 Sobic.006G122500 methyltransferase domain containing protein, expressed -
17 Sobic.001G252401 - -
18 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.001G331500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G412600 expressed protein -


Gene co-expression network
sample Sobic001G374400 Sobic001G374400 Sobic008G193200 Sobic008G193200 Sobic001G374400--Sobic008G193200 Sobic002G324700 Sobic002G324700 Sobic001G374400--Sobic002G324700 Sobic001G176700 Sobic001G176700 Sobic001G374400--Sobic001G176700 Sobic009G133800 Sobic009G133800 Sobic001G374400--Sobic009G133800 Sobic001G298400 Sobic001G298400 Sobic001G374400--Sobic001G298400 Sobic002G085400 Sobic002G085400 Sobic001G374400--Sobic002G085400 Sobic009G049000 Sobic009G049000 Sobic001G374400--Sobic009G049000 Sobic003G285600 Sobic003G285600 Sobic001G374400--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G374400--Sobic007G028200 Sobic008G193200--Sobic009G049000 Sobic003G403900 Sobic003G403900 Sobic008G193200--Sobic003G403900 Sobic008G193200--Sobic001G374400 Sobic001G252401 Sobic001G252401 Sobic008G193200--Sobic001G252401 Sobic010G188300 Sobic010G188300 Sobic008G193200--Sobic010G188300 Sobic010G042400 Sobic010G042400 Sobic008G193200--Sobic010G042400 Sobic004G165700 Sobic004G165700 Sobic008G193200--Sobic004G165700 Sobic008G193200--Sobic001G298400 Sobic010G006300 Sobic010G006300 Sobic008G193200--Sobic010G006300 Sobic002G324700--Sobic001G374400 Sobic008G047100 Sobic008G047100 Sobic002G324700--Sobic008G047100 Sobic004G186800 Sobic004G186800 Sobic002G324700--Sobic004G186800 Sobic003G139700 Sobic003G139700 Sobic002G324700--Sobic003G139700 Sobic004G111200 Sobic004G111200 Sobic002G324700--Sobic004G111200 Sobic001G087800 Sobic001G087800 Sobic002G324700--Sobic001G087800 Sobic009G152800 Sobic009G152800 Sobic002G324700--Sobic009G152800 Sobic002G324700--Sobic001G176700 Sobic003G064901 Sobic003G064901 Sobic002G324700--Sobic003G064901 Sobic010G162200 Sobic010G162200 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic001G176700--Sobic010G006300 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic008G044450 Sobic008G044450 Sobic009G133800--Sobic008G044450 Sobic009G133800--Sobic007G028200 Sobic009G133800--Sobic001G176700 Sobic009G133800--Sobic010G162200 Sobic008G061300 Sobic008G061300 Sobic009G133800--Sobic008G061300 Sobic007G123700 Sobic007G123700 Sobic009G133800--Sobic007G123700 Sobic009G133800--Sobic001G374400 Sobic009G133800--Sobic003G285600 Sobic003G339300 Sobic003G339300 Sobic009G133800--Sobic003G339300 Sobic010G104800 Sobic010G104800 Sobic001G298400--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic001G298400--Sobic001G073300 Sobic001G331500 Sobic001G331500 Sobic001G298400--Sobic001G331500 Sobic009G256100 Sobic009G256100 Sobic001G298400--Sobic009G256100 Sobic003G314000 Sobic003G314000 Sobic001G298400--Sobic003G314000 Sobic002G119100 Sobic002G119100 Sobic001G298400--Sobic002G119100 Sobic004G165500 Sobic004G165500 Sobic001G298400--Sobic004G165500 Sobic010G218200 Sobic010G218200 Sobic001G298400--Sobic010G218200 Sobic002G404800 Sobic002G404800 Sobic001G298400--Sobic002G404800 Sobic002G085400--Sobic001G298400 Sobic002G085400--Sobic001G374400 Sobic002G085400--Sobic003G285600 Sobic007G006400 Sobic007G006400 Sobic002G085400--Sobic007G006400 Sobic007G090445 Sobic007G090445 Sobic002G085400--Sobic007G090445 Sobic008G129900 Sobic008G129900 Sobic002G085400--Sobic008G129900 Sobic003G403800 Sobic003G403800 Sobic002G085400--Sobic003G403800 Sobic003G097600 Sobic003G097600 Sobic002G085400--Sobic003G097600 Sobic002G085400--Sobic010G218200 Sobic009G049000--Sobic008G193200 Sobic002G228400 Sobic002G228400 Sobic009G049000--Sobic002G228400 Sobic009G049000--Sobic001G374400 Sobic009G049000--Sobic001G331500 Sobic003G378500 Sobic003G378500 Sobic009G049000--Sobic003G378500 Sobic003G249400 Sobic003G249400 Sobic009G049000--Sobic003G249400 Sobic008G173700 Sobic008G173700 Sobic009G049000--Sobic008G173700 Sobic010G244000 Sobic010G244000 Sobic009G049000--Sobic010G244000 Sobic009G049000--Sobic001G298400 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic007G141300 Sobic007G141300 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G028200--Sobic007G123700
Octagon: transcription factors


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