Gene annotation
Transcriptome id Sobic.001G176700.1
Synonym Sb01g015370
Functional annotation CBS domain containing protein, expressed
UniProt C5WTB7
Pfam PF00571 PF03471 PF01595
Panther DB PTHR22777 PTHR22777:SF3
NCBI CDD KOG2118; Predicted membrane protein, contains two CBS domains
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55930 : CBS domain-containing protein / transporter associated domain-containing protein
RAP-DB (Rice) LOC_Os03g39640.2 : CBS domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007183
Brachypodium KQK14296
Barley HORVU5Hr1G111010.1 , HORVU5Hr1G111010.2
Wheat -
Populus -


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cDNA sequences
Sobic.001G176700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
2 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
3 Sobic.007G028200 cytokinin-O-glucosyltransferase 3, putative, expressed -
4 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.004G197700 expressed protein -
6 Sobic.010G006300 homeobox domain containing protein, expressed -
7 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
8 Sobic.003G097701 - -
9 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
10 Sobic.001G193800 - -
11 Sobic.003G403800 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
13 Sobic.004G095800 - -
14 Sobic.008G061300 - -
15 Sobic.001G252401 - -
16 Sobic.010G125700 HEAT repeat family protein, putative, expressed K06699: proteasome activator subunit 4
17 Sobic.003G421600 - -
18 Sobic.001G445600 DNA polymerase I, putative, expressed -
19 Sobic.007G080780 - -
20 Sobic.007G141300 - -


Gene co-expression network
sample Sobic001G176700 Sobic001G176700 Sobic010G162200 Sobic010G162200 Sobic001G176700--Sobic010G162200 Sobic003G285600 Sobic003G285600 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic010G162200--Sobic004G197700 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic001G252401 Sobic001G252401 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G403800 Sobic003G403800 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic007G141300 Sobic007G141300 Sobic007G028200--Sobic007G141300 Sobic007G028200--Sobic003G097701 Sobic007G028200--Sobic010G162500 Sobic004G095800 Sobic004G095800 Sobic007G028200--Sobic004G095800 Sobic003G421600 Sobic003G421600 Sobic007G028200--Sobic003G421600 Sobic002G025000 Sobic002G025000 Sobic007G028200--Sobic002G025000 Sobic007G028200--Sobic001G176700 Sobic005G166900 Sobic005G166900 Sobic007G028200--Sobic005G166900 Sobic007G123700 Sobic007G123700 Sobic007G028200--Sobic007G123700 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic010G162500--Sobic003G285600 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic009G069450 Sobic009G069450 Sobic004G197700--Sobic009G069450 Sobic003G079725 Sobic003G079725 Sobic004G197700--Sobic003G079725 Sobic004G197700--Sobic003G097701 Sobic003G089700 Sobic003G089700 Sobic004G197700--Sobic003G089700 Sobic005G068300 Sobic005G068300 Sobic004G197700--Sobic005G068300 Sobic004G197700--Sobic007G004750 Sobic001G249900 Sobic001G249900 Sobic004G197700--Sobic001G249900 Sobic004G197700--Sobic008G157700 Sobic006G078450 Sobic006G078450 Sobic004G197700--Sobic006G078450 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic010G006300--Sobic003G403800 Sobic006G122500 Sobic006G122500 Sobic010G006300--Sobic006G122500 Sobic007G080780 Sobic007G080780 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400 Sobic008G044450 Sobic008G044450 Sobic009G133800--Sobic008G044450 Sobic009G133800--Sobic007G028200 Sobic009G133800--Sobic001G176700 Sobic009G133800--Sobic010G162200 Sobic008G061300 Sobic008G061300 Sobic009G133800--Sobic008G061300 Sobic009G133800--Sobic007G123700 Sobic001G374400 Sobic001G374400 Sobic009G133800--Sobic001G374400 Sobic009G133800--Sobic003G285600 Sobic003G339300 Sobic003G339300 Sobic009G133800--Sobic003G339300 Sobic003G097701--Sobic005G166900 Sobic005G167100 Sobic005G167100 Sobic003G097701--Sobic005G167100 Sobic001G054050 Sobic001G054050 Sobic003G097701--Sobic001G054050 Sobic010G107601 Sobic010G107601 Sobic003G097701--Sobic010G107601 Sobic003G097701--Sobic002G025000 Sobic003G172400 Sobic003G172400 Sobic003G097701--Sobic003G172400 Sobic010G225400 Sobic010G225400 Sobic003G097701--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic003G097701--Sobic008G140050 Sobic007G141650 Sobic007G141650 Sobic003G097701--Sobic007G141650 Sobic004G268600 Sobic004G268600 Sobic004G208301--Sobic004G268600 Sobic003G160300 Sobic003G160300 Sobic004G208301--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic004G208301--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic004G208301--Sobic007G085900 Sobic004G208301--Sobic001G054050 Sobic001G128000 Sobic001G128000 Sobic004G208301--Sobic001G128000 Sobic002G390200 Sobic002G390200 Sobic004G208301--Sobic002G390200 Sobic003G337200 Sobic003G337200 Sobic004G208301--Sobic003G337200 Sobic009G192200 Sobic009G192200 Sobic004G208301--Sobic009G192200
Octagon: transcription factors


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