Gene annotation
Transcriptome id Sobic.010G125700.1
Synonym PA200
Functional annotation HEAT repeat family protein, putative, expressed
UniProt A0A1W0VSN4 , C6JSP8
Pfam PF11919 PF16507
Panther DB PTHR32170 PTHR32170:SF0
NCBI CDD -
KEGG Orthology K06699; proteasome activator subunit 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13330 : proteasome activating protein 200
RAP-DB (Rice) LOC_Os06g19730.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a042776
Brachypodium KQK18512 , KQK18513 , KQK18511
Barley HORVU7Hr1G045410.32 , HORVU7Hr1G045410.1 , HORVU7Hr1G045410.3 , HORVU7Hr1G045410.2 , HORVU7Hr1G045410.5 , HORVU7Hr1G045410.4 , HORVU7Hr1G045410.7 , HORVU7Hr1G045410.6 , HORVU7Hr1G045410.9 , HORVU7Hr1G045410.8 , HORVU7Hr1G045410.33 , HORVU7Hr1G045410.31 , HORVU7Hr1G045410.30 , HORVU7Hr1G045410.20 , HORVU7Hr1G045410.21 , HORVU7Hr1G045410.22 , HORVU7Hr1G045410.23 , HORVU7Hr1G045410.24 , HORVU7Hr1G045410.25 , HORVU7Hr1G045410.26 , HORVU7Hr1G045410.27 , HORVU7Hr1G045410.28 , HORVU7Hr1G045410.29 , HORVU7Hr1G045410.15 , HORVU7Hr1G045410.14 , HORVU7Hr1G045410.17 , HORVU7Hr1G045410.16 , HORVU7Hr1G045410.11 , HORVU7Hr1G045410.10 , HORVU7Hr1G045410.13 , HORVU7Hr1G045410.12 , HORVU7Hr1G045410.19 , HORVU7Hr1G045410.18
Wheat TraesCS7D02G222300 , TraesCS7D02G222300 , TraesCS7D02G222300 , TraesCS7A02G219800 , TraesCS7A02G219800 , TraesCS7A02G219800 , TraesCS7B02G127600 , TraesCS7B02G127600 , TraesCS7B02G127600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G138600 DIE2/ALG10 family, putative, expressed K03850: alpha-1,2-glucosyltransferase
2 Sobic.001G176700 CBS domain containing protein, expressed -
3 Sobic.003G421600 - -
4 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
5 Sobic.006G027200 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.010G162200 serine/threonine-protein kinase 19, putative, expressed K08880: serine/threonine kinase 19
7 Sobic.007G118400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.004G268600 nodulin, putative, expressed -
9 Sobic.007G123700 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.005G068300 - -
11 Sobic.003G172450 - -
12 Sobic.006G139200 zinc knuckle family protein, expressed -
13 Sobic.008G061300 - -
14 Sobic.002G397700 - -
15 Sobic.009G087480 - -
16 Sobic.010G107901 - K13104: ZNF830, zinc finger protein 830
17 Sobic.002G139700 tubulin binding cofactor C, putative, expressed -
18 Sobic.001G535500 folylpolyglutamate synthase(PubMedID : 33924915)@folylpolyglutamate synthase, mitochondrial precursor, putative, expressed K01930: folylpolyglutamate synthase
19 Sobic.004G186800 - -
20 Sobic.008G024900 expressed protein -


Gene co-expression network
sample Sobic010G125700 Sobic010G125700 Sobic006G138600 Sobic006G138600 Sobic010G125700--Sobic006G138600 Sobic001G176700 Sobic001G176700 Sobic010G125700--Sobic001G176700 Sobic003G421600 Sobic003G421600 Sobic010G125700--Sobic003G421600 Sobic004G208301 Sobic004G208301 Sobic010G125700--Sobic004G208301 Sobic006G027200 Sobic006G027200 Sobic010G125700--Sobic006G027200 Sobic010G162200 Sobic010G162200 Sobic010G125700--Sobic010G162200 Sobic007G118400 Sobic007G118400 Sobic010G125700--Sobic007G118400 Sobic004G268600 Sobic004G268600 Sobic010G125700--Sobic004G268600 Sobic007G123700 Sobic007G123700 Sobic010G125700--Sobic007G123700 Sobic001G098100 Sobic001G098100 Sobic006G138600--Sobic001G098100 Sobic006G138600--Sobic010G125700 Sobic005G008500 Sobic005G008500 Sobic006G138600--Sobic005G008500 Sobic006G138600--Sobic006G027200 Sobic009G038600 Sobic009G038600 Sobic006G138600--Sobic009G038600 Sobic001G408500 Sobic001G408500 Sobic006G138600--Sobic001G408500 Sobic010G051200 Sobic010G051200 Sobic006G138600--Sobic010G051200 Sobic006G223200 Sobic006G223200 Sobic006G138600--Sobic006G223200 Sobic006G138600--Sobic007G118400 Sobic001G176700--Sobic010G162200 Sobic003G285600 Sobic003G285600 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic001G176700--Sobic004G208301 Sobic006G139200 Sobic006G139200 Sobic003G421600--Sobic006G139200 Sobic002G040550 Sobic002G040550 Sobic003G421600--Sobic002G040550 Sobic003G172450 Sobic003G172450 Sobic003G421600--Sobic003G172450 Sobic010G107901 Sobic010G107901 Sobic003G421600--Sobic010G107901 Sobic002G180732 Sobic002G180732 Sobic003G421600--Sobic002G180732 Sobic002G390200 Sobic002G390200 Sobic003G421600--Sobic002G390200 Sobic002G397700 Sobic002G397700 Sobic003G421600--Sobic002G397700 Sobic009G087480 Sobic009G087480 Sobic003G421600--Sobic009G087480 Sobic004G234766 Sobic004G234766 Sobic003G421600--Sobic004G234766 Sobic004G208301--Sobic004G268600 Sobic003G160300 Sobic003G160300 Sobic004G208301--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic004G208301--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic004G208301--Sobic007G085900 Sobic001G054050 Sobic001G054050 Sobic004G208301--Sobic001G054050 Sobic001G128000 Sobic001G128000 Sobic004G208301--Sobic001G128000 Sobic004G208301--Sobic002G390200 Sobic003G337200 Sobic003G337200 Sobic004G208301--Sobic003G337200 Sobic009G192200 Sobic009G192200 Sobic004G208301--Sobic009G192200 Sobic005G156450 Sobic005G156450 Sobic006G027200--Sobic005G156450 Sobic006G027200--Sobic009G087480 Sobic008G024900 Sobic008G024900 Sobic006G027200--Sobic008G024900 Sobic006G093550 Sobic006G093550 Sobic006G027200--Sobic006G093550 Sobic006G027200--Sobic003G172450 Sobic009G199800 Sobic009G199800 Sobic006G027200--Sobic009G199800 Sobic010G133225 Sobic010G133225 Sobic006G027200--Sobic010G133225 Sobic006G027200--Sobic004G268600 Sobic006G027200--Sobic010G107901 Sobic010G162200--Sobic001G176700 Sobic010G162200--Sobic003G285600 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic010G162200--Sobic004G197700 Sobic007G118400--Sobic004G208301 Sobic007G118400--Sobic007G123700 Sobic007G118400--Sobic003G337200 Sobic007G118400--Sobic003G172450 Sobic007G118400--Sobic006G139200 Sobic005G068300 Sobic005G068300 Sobic007G118400--Sobic005G068300 Sobic007G118400--Sobic010G107901 Sobic007G118400--Sobic002G397700 Sobic007G118400--Sobic004G268600 Sobic004G268600--Sobic003G337200 Sobic004G268600--Sobic001G128000 Sobic004G268600--Sobic002G180732 Sobic004G268600--Sobic004G234766 Sobic004G268600--Sobic003G160433 Sobic005G163932 Sobic005G163932 Sobic004G268600--Sobic005G163932 Sobic004G268600--Sobic010G107901 Sobic004G268600--Sobic008G024900 Sobic003G119750 Sobic003G119750 Sobic004G268600--Sobic003G119750 Sobic007G123700--Sobic006G139200 Sobic007G123700--Sobic002G040550 Sobic007G123700--Sobic009G087480 Sobic007G123700--Sobic003G172450 Sobic007G123700--Sobic002G390200 Sobic007G123700--Sobic008G024900 Sobic007G123700--Sobic002G180732 Sobic004G282933 Sobic004G282933 Sobic007G123700--Sobic004G282933 Sobic007G123700--Sobic010G107901
Octagon: transcription factors


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