Gene annotation
Transcriptome id Sobic.001G535500.2,Sobic.001G535500.3
Synonym Bmr19, Brown midrib 19, DFB, ATDFB
Functional annotation folylpolyglutamate synthase (PubMedID : 33924915)
folylpolyglutamate synthase, mitochondrial precursor, putative, expressed
UniProt A0A1Z5SBT8 , A0A1Z5SBS9
Pfam PF08245
Panther DB PTHR11136 PTHR11136:SF6
NCBI CDD -
KEGG Orthology K01930; folylpolyglutamate synthase
Gene Ontology GO:0009058; biosynthetic process GO:0005524ATP binding GO:0009396folic acid-containing compound biosynthetic process GO:0004326tetrahydrofolylpolyglutamate synthase activity GO:0009396folic acid-containing compound biosynthetic process GO:0005524ATP binding GO:0004326tetrahydrofolylpolyglutamate synthase activity


Orthologs (automatic annotation)
TAIR AT5G05980 : DHFS-FPGS homolog B
RAP-DB (Rice) LOC_Os03g02030.1 : folylpolyglutamate synthase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a053538
Brachypodium KQJ97349 , KQK24048
Barley HORVU4Hr1G089590.7 , HORVU4Hr1G089590.4 , HORVU4Hr1G089590.3 , HORVU4Hr1G089590.2 , HORVU4Hr1G089590.1 , HORVU4Hr1G089590.9 , HORVU4Hr1G089590.8 , HORVU4Hr1G089590.17 , HORVU4Hr1G089590.16 , HORVU4Hr1G089590.15 , HORVU4Hr1G089590.14 , HORVU4Hr1G089590.13 , HORVU4Hr1G089590.12 , HORVU4Hr1G089590.11 , HORVU4Hr1G089590.10 , HORVU4Hr1G089620.1
Wheat TraesCS2A02G103700 , TraesCS4B02G392600 , TraesCSU02G034000 , TraesCS1A02G173700
Populus -


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cDNA sequences
Sobic.001G535500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G217800 - -
2 Sobic.005G101400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.009G104850 - -
4 Sobic.004G272500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
5 Sobic.005G167450 - -
6 Sobic.003G160400 zinc knuckle family protein, expressed -
7 Sobic.004G104200 berberine and berberine like domain containing protein, expressed -
8 Sobic.005G167100 - -
9 Sobic.003G119750 - -
10 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
11 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
12 Sobic.003G172400 conserved hypothetical protein -
13 Sobic.004G337600 - -
14 Sobic.010G225400 expressed protein -
15 Sobic.010G107601 - -
16 Sobic.002G322101 - -
17 Sobic.003G344300 - -
18 Sobic.005G126900 - -
19 Sobic.004G234766 - -
20 Sobic.010G173600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase


Gene co-expression network
sample Sobic001G535500 Sobic001G535500 Sobic001G217800 Sobic001G217800 Sobic001G535500--Sobic001G217800 Sobic005G101400 Sobic005G101400 Sobic001G535500--Sobic005G101400 Sobic009G104850 Sobic009G104850 Sobic001G535500--Sobic009G104850 Sobic004G272500 Sobic004G272500 Sobic001G535500--Sobic004G272500 Sobic005G167450 Sobic005G167450 Sobic001G535500--Sobic005G167450 Sobic003G160400 Sobic003G160400 Sobic001G535500--Sobic003G160400 Sobic004G104200 Sobic004G104200 Sobic001G535500--Sobic004G104200 Sobic005G167100 Sobic005G167100 Sobic001G535500--Sobic005G167100 Sobic003G119750 Sobic003G119750 Sobic001G535500--Sobic003G119750 Sobic001G217800--Sobic005G101400 Sobic001G217800--Sobic009G104850 Sobic003G249300 Sobic003G249300 Sobic001G217800--Sobic003G249300 Sobic001G217800--Sobic005G167450 Sobic001G540250 Sobic001G540250 Sobic001G217800--Sobic001G540250 Sobic001G217800--Sobic004G272500 Sobic002G341600 Sobic002G341600 Sobic001G217800--Sobic002G341600 Sobic009G029100 Sobic009G029100 Sobic001G217800--Sobic009G029100 Sobic001G302100 Sobic001G302100 Sobic001G217800--Sobic001G302100 Sobic005G101400--Sobic001G217800 Sobic005G101400--Sobic009G104850 Sobic005G101400--Sobic005G167450 Sobic005G101400--Sobic004G272500 Sobic005G101400--Sobic001G540250 Sobic009G069450 Sobic009G069450 Sobic005G101400--Sobic009G069450 Sobic005G101400--Sobic003G249300 Sobic002G322101 Sobic002G322101 Sobic005G101400--Sobic002G322101 Sobic003G169400 Sobic003G169400 Sobic005G101400--Sobic003G169400 Sobic009G104850--Sobic004G272500 Sobic009G104850--Sobic001G217800 Sobic010G225400 Sobic010G225400 Sobic009G104850--Sobic010G225400 Sobic009G104850--Sobic005G101400 Sobic009G104850--Sobic003G160400 Sobic009G104850--Sobic005G167100 Sobic009G104850--Sobic005G167450 Sobic010G107601 Sobic010G107601 Sobic009G104850--Sobic010G107601 Sobic004G234766 Sobic004G234766 Sobic009G104850--Sobic004G234766 Sobic004G272500--Sobic009G104850 Sobic008G160300 Sobic008G160300 Sobic004G272500--Sobic008G160300 Sobic004G272500--Sobic010G107601 Sobic004G337600 Sobic004G337600 Sobic004G272500--Sobic004G337600 Sobic003G172400 Sobic003G172400 Sobic004G272500--Sobic003G172400 Sobic005G096500 Sobic005G096500 Sobic004G272500--Sobic005G096500 Sobic004G272500--Sobic003G169400 Sobic003G168500 Sobic003G168500 Sobic004G272500--Sobic003G168500 Sobic003G171900 Sobic003G171900 Sobic004G272500--Sobic003G171900 Sobic005G167450--Sobic001G217800 Sobic005G167450--Sobic005G101400 Sobic005G167450--Sobic009G104850 Sobic005G167450--Sobic003G249300 Sobic005G167450--Sobic004G272500 Sobic005G167450--Sobic010G225400 Sobic005G167450--Sobic004G234766 Sobic010G107901 Sobic010G107901 Sobic005G167450--Sobic010G107901 Sobic006G093550 Sobic006G093550 Sobic005G167450--Sobic006G093550 Sobic007G085900 Sobic007G085900 Sobic003G160400--Sobic007G085900 Sobic005G216900 Sobic005G216900 Sobic003G160400--Sobic005G216900 Sobic003G160300 Sobic003G160300 Sobic003G160400--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic003G160400--Sobic003G160433 Sobic001G128000 Sobic001G128000 Sobic003G160400--Sobic001G128000 Sobic001G054050 Sobic001G054050 Sobic003G160400--Sobic001G054050 Sobic002G390200 Sobic002G390200 Sobic003G160400--Sobic002G390200 Sobic008G140050 Sobic008G140050 Sobic003G160400--Sobic008G140050 Sobic006G057100 Sobic006G057100 Sobic003G160400--Sobic006G057100 Sobic004G282933 Sobic004G282933 Sobic004G104200--Sobic004G282933 Sobic009G192200 Sobic009G192200 Sobic004G104200--Sobic009G192200 Sobic004G104200--Sobic007G085900 Sobic004G104200--Sobic008G140050 Sobic004G104200--Sobic003G160400 Sobic004G104200--Sobic005G167100 Sobic004G104200--Sobic006G057100 Sobic008G024900 Sobic008G024900 Sobic004G104200--Sobic008G024900 Sobic005G028500 Sobic005G028500 Sobic004G104200--Sobic005G028500 Sobic005G167100--Sobic003G172400 Sobic005G167100--Sobic010G107601 Sobic005G167100--Sobic005G096500 Sobic005G167100--Sobic008G160300 Sobic010G201266 Sobic010G201266 Sobic005G167100--Sobic010G201266 Sobic002G278100 Sobic002G278100 Sobic005G167100--Sobic002G278100 Sobic005G167100--Sobic003G169400 Sobic005G167100--Sobic003G171900 SobicK029400 SobicK029400 Sobic005G167100--SobicK029400 Sobic001G293900 Sobic001G293900 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic007G004750 Sobic007G004750 Sobic003G119750--Sobic007G004750 Sobic010G132200 Sobic010G132200 Sobic003G119750--Sobic010G132200 Sobic003G168800 Sobic003G168800 Sobic003G119750--Sobic003G168800 Sobic003G423400 Sobic003G423400 Sobic003G119750--Sobic003G423400 Sobic006G192600 Sobic006G192600 Sobic003G119750--Sobic006G192600 Sobic003G119750--Sobic001G128000 Sobic003G119750--Sobic003G169400
Octagon: transcription factors


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