Gene annotation
Transcriptome id Sobic.010G162200.7,Sobic.010G162200.2,Sobic.010G162200.4,Sobic.010G162200.6,Sobic.010G162200.5
Synonym Sb10g021660
Functional annotation serine/threonine-protein kinase 19, putative, expressed
UniProt A0A194YJJ9 , C5Z477
Pfam PF10494
Panther DB PTHR15243 PTHR15243:SF0
NCBI CDD -
KEGG Orthology K08880; serine/threonine kinase 19
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20495 : -
RAP-DB (Rice) LOC_Os07g27460.1,LOC_Os07g27460.2 : serine/threonine-protein kinase 19, putative, expressed
MaizeGDB (Corn) Zm00025a051105
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G162200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G176700 CBS domain containing protein, expressed -
2 Sobic.003G285600 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
3 Sobic.003G097701 - -
4 Sobic.007G004750 - -
5 Sobic.007G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
6 Sobic.003G288500 - -
7 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
8 Sobic.008G157700 BURP domain containing protein, expressed -
9 Sobic.004G197700 expressed protein -
10 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.006G121600 cytochrome P450, putative, expressed -
12 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
13 Sobic.009G133800 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
14 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
15 Sobic.004G251400 - -
16 Sobic.009G069450 - -
17 Sobic.003G354050 - -
18 Sobic.006G124850 - K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
19 Sobic.002G149966 - -
20 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16


Gene co-expression network
sample Sobic010G162200 Sobic010G162200 Sobic001G176700 Sobic001G176700 Sobic010G162200--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162200--Sobic003G285600 Sobic003G097701 Sobic003G097701 Sobic010G162200--Sobic003G097701 Sobic007G004750 Sobic007G004750 Sobic010G162200--Sobic007G004750 Sobic007G092000 Sobic007G092000 Sobic010G162200--Sobic007G092000 Sobic003G288500 Sobic003G288500 Sobic010G162200--Sobic003G288500 Sobic010G162500 Sobic010G162500 Sobic010G162200--Sobic010G162500 Sobic008G157700 Sobic008G157700 Sobic010G162200--Sobic008G157700 Sobic004G197700 Sobic004G197700 Sobic010G162200--Sobic004G197700 Sobic001G176700--Sobic010G162200 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic001G176700--Sobic010G162500 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301 Sobic003G285600--Sobic010G162200 Sobic003G285600--Sobic001G176700 Sobic003G285600--Sobic010G162500 Sobic001G252401 Sobic001G252401 Sobic003G285600--Sobic001G252401 Sobic003G285600--Sobic010G006300 Sobic003G050000 Sobic003G050000 Sobic003G285600--Sobic003G050000 Sobic003G403800 Sobic003G403800 Sobic003G285600--Sobic003G403800 Sobic003G285600--Sobic007G028200 Sobic003G285600--Sobic003G097701 Sobic005G166900 Sobic005G166900 Sobic003G097701--Sobic005G166900 Sobic005G167100 Sobic005G167100 Sobic003G097701--Sobic005G167100 Sobic001G054050 Sobic001G054050 Sobic003G097701--Sobic001G054050 Sobic010G107601 Sobic010G107601 Sobic003G097701--Sobic010G107601 Sobic002G025000 Sobic002G025000 Sobic003G097701--Sobic002G025000 Sobic003G172400 Sobic003G172400 Sobic003G097701--Sobic003G172400 Sobic010G225400 Sobic010G225400 Sobic003G097701--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic003G097701--Sobic008G140050 Sobic007G141650 Sobic007G141650 Sobic003G097701--Sobic007G141650 Sobic001G293900 Sobic001G293900 Sobic007G004750--Sobic001G293900 Sobic003G119750 Sobic003G119750 Sobic007G004750--Sobic003G119750 Sobic010G132200 Sobic010G132200 Sobic007G004750--Sobic010G132200 Sobic003G168800 Sobic003G168800 Sobic007G004750--Sobic003G168800 Sobic003G354166 Sobic003G354166 Sobic007G004750--Sobic003G354166 Sobic003G344300 Sobic003G344300 Sobic007G004750--Sobic003G344300 Sobic007G004750--Sobic008G157700 Sobic003G423400 Sobic003G423400 Sobic007G004750--Sobic003G423400 Sobic003G169400 Sobic003G169400 Sobic007G004750--Sobic003G169400 Sobic009G016666 Sobic009G016666 Sobic007G092000--Sobic009G016666 Sobic007G092000--Sobic003G097701 Sobic002G130200 Sobic002G130200 Sobic007G092000--Sobic002G130200 Sobic006G057050 Sobic006G057050 Sobic007G092000--Sobic006G057050 Sobic003G172701 Sobic003G172701 Sobic007G092000--Sobic003G172701 Sobic004G087050 Sobic004G087050 Sobic007G092000--Sobic004G087050 Sobic009G174150 Sobic009G174150 Sobic007G092000--Sobic009G174150 Sobic009G123100 Sobic009G123100 Sobic007G092000--Sobic009G123100 Sobic003G168425 Sobic003G168425 Sobic007G092000--Sobic003G168425 Sobic006G017266 Sobic006G017266 Sobic003G288500--Sobic006G017266 Sobic005G093600 Sobic005G093600 Sobic003G288500--Sobic005G093600 Sobic003G288500--Sobic007G004750 Sobic003G288500--Sobic001G293900 Sobic003G288500--Sobic008G157700 Sobic010G173600 Sobic010G173600 Sobic003G288500--Sobic010G173600 Sobic003G128575 Sobic003G128575 Sobic003G288500--Sobic003G128575 Sobic006G124850 Sobic006G124850 Sobic003G288500--Sobic006G124850 Sobic002G322101 Sobic002G322101 Sobic003G288500--Sobic002G322101 Sobic010G162500--Sobic010G006300 Sobic010G162500--Sobic007G028200 Sobic010G162500--Sobic001G176700 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic010G162500--Sobic001G252401 Sobic010G162500--Sobic010G162200 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic008G157700--Sobic006G124850 Sobic003G168350 Sobic003G168350 Sobic008G157700--Sobic003G168350 Sobic008G157700--Sobic003G128575 Sobic008G157700--Sobic006G017266 Sobic002G014900 Sobic002G014900 Sobic008G157700--Sobic002G014900 Sobic005G183450 Sobic005G183450 Sobic008G157700--Sobic005G183450 Sobic006G020350 Sobic006G020350 Sobic008G157700--Sobic006G020350 Sobic008G157700--Sobic001G293900 Sobic002G150032 Sobic002G150032 Sobic008G157700--Sobic002G150032 Sobic009G069450 Sobic009G069450 Sobic004G197700--Sobic009G069450 Sobic003G079725 Sobic003G079725 Sobic004G197700--Sobic003G079725 Sobic004G197700--Sobic003G097701 Sobic003G089700 Sobic003G089700 Sobic004G197700--Sobic003G089700 Sobic005G068300 Sobic005G068300 Sobic004G197700--Sobic005G068300 Sobic004G197700--Sobic007G004750 Sobic001G249900 Sobic001G249900 Sobic004G197700--Sobic001G249900 Sobic004G197700--Sobic008G157700 Sobic006G078450 Sobic006G078450 Sobic004G197700--Sobic006G078450
Octagon: transcription factors


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