Gene annotation
Transcriptome id Sobic.003G172900.1
Synonym Sb03g020190
Functional annotation NADPH-dependent oxidoreductase, putative, expressed
UniProt A0A109NDE9 , C5XLG1 , Q09EM1 , A0A120GUS2 , A1E9S7
Pfam PF00329
Panther DB PTHR10884 PTHR10884:SF9
NCBI CDD KOG1713; NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit
KEGG Orthology K05581; NAD(P)H-quinone oxidoreductase subunit J
Gene Ontology GO:0008137; NADH dehydrogenase (ubiquinone) activity


Orthologs (automatic annotation)
TAIR ATCG00420 : NADH dehydrogenase subunit J
RAP-DB (Rice) LOC_Os10g38212.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT70988 , KQK18169 , KQK12466 , KQJ84936 , KQK04351
Barley HORVU0Hr1G036840.1 , HORVU2Hr1G030340.1 , AGP50758 , HORVU0Hr1G032800.1 , HORVU0Hr1G024980.1 , HORVU0Hr1G029760.1 , HORVU1Hr1G089640.1 , HORVU6Hr1G049230.1 , HORVU0Hr1G033820.1 , HORVU4Hr1G045230.1 , HORVU6Hr1G089120.1 , HORVU1Hr1G039610.2 , HORVU0Hr1G036370.1 , HORVU0Hr1G031430.1 , HORVU5Hr1G064670.1 , HORVU2Hr1G035340.1
Wheat TraesCS5D02G010700 , TraesCS1D02G181200 , TraesCS4A02G152300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G251400 - -
2 Sobic.002G150032 - -
3 Sobic.001G266000 OsClp10 - Putative Clp protease homologue, expressed -
4 Sobic.003G173266 - K02956: RP-S15, MRPS15, small subunit ribosomal protein S15
5 Sobic.004G087000 ATP synthase subunit beta, putative, expressed K02112: ATPF1B, F-type H+/Na+-transporting ATPase subunit beta
6 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
7 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
8 Sobic.002G222000 - -
9 Sobic.002G149966 - -
10 Sobic.003G169300 chloroplast 30S ribosomal protein S2, putative, expressed K02967: RP-S2, MRPS2, small subunit ribosomal protein S2
11 Sobic.007G109200 ATP synthase epsilon chain, putative, expressed K02114: ATPF1E, F-type H+-transporting ATPase subunit epsilon
12 Sobic.004G337600 - -
13 Sobic.002G014900 OsFBD13 - F-box and FBD domain containing protein, expressed -
14 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
15 Sobic.010G254000 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
16 Sobic.005G110493 - -
17 Sobic.002G148166 - -
18 Sobic.003G172701 - -
19 Sobic.006G123800 - -
20 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18


Gene co-expression network
sample Sobic003G172900 Sobic003G172900 Sobic004G251400 Sobic004G251400 Sobic003G172900--Sobic004G251400 Sobic002G150032 Sobic002G150032 Sobic003G172900--Sobic002G150032 Sobic001G266000 Sobic001G266000 Sobic003G172900--Sobic001G266000 Sobic003G173266 Sobic003G173266 Sobic003G172900--Sobic003G173266 Sobic004G087000 Sobic004G087000 Sobic003G172900--Sobic004G087000 Sobic003G172850 Sobic003G172850 Sobic003G172900--Sobic003G172850 Sobic002G044500 Sobic002G044500 Sobic003G172900--Sobic002G044500 Sobic002G222000 Sobic002G222000 Sobic003G172900--Sobic002G222000 Sobic002G149966 Sobic002G149966 Sobic003G172900--Sobic002G149966 Sobic004G251400--Sobic003G172900 Sobic004G251400--Sobic004G087000 Sobic007G109200 Sobic007G109200 Sobic004G251400--Sobic007G109200 Sobic004G251400--Sobic003G173266 Sobic003G169300 Sobic003G169300 Sobic004G251400--Sobic003G169300 Sobic004G251400--Sobic003G172850 Sobic004G337600 Sobic004G337600 Sobic004G251400--Sobic004G337600 Sobic003G172701 Sobic003G172701 Sobic004G251400--Sobic003G172701 Sobic005G110493 Sobic005G110493 Sobic004G251400--Sobic005G110493 Sobic002G150032--Sobic002G149966 Sobic002G014900 Sobic002G014900 Sobic002G150032--Sobic002G014900 Sobic002G150032--Sobic001G266000 Sobic002G150032--Sobic003G172900 Sobic002G150032--Sobic002G044500 Sobic002G150032--Sobic003G172850 Sobic003G290050 Sobic003G290050 Sobic002G150032--Sobic003G290050 Sobic006G124850 Sobic006G124850 Sobic002G150032--Sobic006G124850 Sobic002G150032--Sobic004G251400 Sobic001G266000--Sobic002G150032 Sobic001G266000--Sobic003G172900 Sobic001G266000--Sobic002G149966 Sobic001G266000--Sobic003G172850 Sobic001G266000--Sobic003G173266 Sobic001G266000--Sobic002G014900 Sobic001G266000--Sobic002G044500 Sobic001G266000--Sobic002G222000 Sobic006G123800 Sobic006G123800 Sobic001G266000--Sobic006G123800 Sobic003G173266--Sobic003G169300 Sobic003G173266--Sobic003G172900 Sobic003G173266--Sobic003G172850 Sobic003G173266--Sobic001G266000 Sobic003G173266--Sobic004G251400 Sobic003G173266--Sobic002G222000 Sobic003G173266--Sobic005G110493 Sobic002G148166 Sobic002G148166 Sobic003G173266--Sobic002G148166 Sobic010G052866 Sobic010G052866 Sobic003G173266--Sobic010G052866 Sobic004G087000--Sobic007G109200 Sobic004G087000--Sobic004G251400 Sobic004G087000--Sobic003G172900 Sobic004G087000--Sobic003G172701 Sobic004G087000--Sobic002G148166 Sobic004G087000--Sobic003G173266 Sobic004G087000--Sobic003G169300 Sobic004G087000--Sobic005G110493 Sobic004G087000--Sobic002G222000 Sobic003G168500 Sobic003G168500 Sobic003G172850--Sobic003G168500 Sobic003G172850--Sobic001G266000 Sobic003G172850--Sobic003G173266 Sobic003G172850--Sobic002G044500 Sobic003G172850--Sobic003G172900 Sobic003G172850--Sobic002G150032 Sobic003G172850--Sobic003G169300 Sobic003G168800 Sobic003G168800 Sobic003G172850--Sobic003G168800 Sobic003G172850--Sobic004G251400 Sobic002G044500--Sobic003G168500 Sobic002G044500--Sobic002G149966 Sobic003G169400 Sobic003G169400 Sobic002G044500--Sobic003G169400 Sobic002G044500--Sobic002G150032 Sobic002G044500--Sobic004G337600 Sobic002G044500--Sobic003G172850 Sobic002G044500--Sobic003G172900 Sobic002G044500--Sobic006G124850 Sobic002G044500--Sobic001G266000 Sobic002G222000--Sobic003G172900 Sobic002G222000--Sobic002G148166 Sobic010G254000 Sobic010G254000 Sobic002G222000--Sobic010G254000 Sobic002G222000--Sobic003G173266 Sobic002G222000--Sobic001G266000 Sobic005G002050 Sobic005G002050 Sobic002G222000--Sobic005G002050 Sobic002G222000--Sobic003G169300 Sobic002G222000--Sobic005G110493 Sobic003G130200 Sobic003G130200 Sobic002G222000--Sobic003G130200 Sobic002G149966--Sobic002G150032 Sobic002G149966--Sobic002G044500 Sobic002G149966--Sobic006G124850 Sobic002G149966--Sobic001G266000 Sobic002G149966--Sobic003G290050 Sobic002G149966--Sobic002G014900 Sobic002G149966--Sobic003G172900 Sobic002G149966--Sobic003G168500 Sobic002G149966--Sobic003G172850
Octagon: transcription factors


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