Gene annotation
Transcriptome id Sobic.010G254000.1
Synonym CAS1, Sb10g029175
Functional annotation cycloartenol synthase, putative, expressed
UniProt C5Z996
Pfam PF00432
Panther DB PTHR11764 PTHR11764:SF14
NCBI CDD -
KEGG Orthology K19011; achilleol B synthase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os11g18194.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) Zm00025a018390 , Zm00025a018391
Brachypodium PNT75939 , KQK18376 , KQK18377
Barley HORVU7Hr1G047800.51 , HORVU7Hr1G047800.1 , HORVU7Hr1G047800.2 , HORVU7Hr1G047800.3 , HORVU7Hr1G047800.4 , HORVU7Hr1G047800.8 , HORVU7Hr1G047800.9 , HORVU7Hr1G047800.23 , HORVU7Hr1G047800.22 , HORVU7Hr1G047800.21 , HORVU7Hr1G047800.20 , HORVU7Hr1G047800.27 , HORVU7Hr1G047800.26 , HORVU7Hr1G047800.25 , HORVU7Hr1G047800.24 , HORVU7Hr1G047800.29 , HORVU7Hr1G047800.28 , HORVU0Hr1G025390.7 , HORVU0Hr1G025390.5 , HORVU0Hr1G025390.4 , HORVU0Hr1G025390.2 , HORVU0Hr1G025390.1 , HORVU7Hr1G047800.30 , HORVU7Hr1G047800.31 , HORVU7Hr1G047800.32 , HORVU7Hr1G047800.33 , HORVU7Hr1G047800.34 , HORVU7Hr1G047800.35 , HORVU7Hr1G047800.36 , HORVU7Hr1G047800.37 , HORVU7Hr1G047800.38 , HORVU7Hr1G047800.39 , HORVU7Hr1G047800.18 , HORVU7Hr1G047800.19 , HORVU7Hr1G047800.12 , HORVU7Hr1G047800.13 , HORVU7Hr1G047800.10 , HORVU7Hr1G047800.11 , HORVU7Hr1G047800.16 , HORVU7Hr1G047800.17 , HORVU7Hr1G047800.14 , HORVU7Hr1G047800.15 , HORVU7Hr1G047800.41 , HORVU7Hr1G047800.43 , HORVU7Hr1G047800.42 , HORVU7Hr1G047800.45 , HORVU7Hr1G047800.49 , HORVU7Hr1G047800.48 , HORVU0Hr1G025390.13 , HORVU0Hr1G025390.12 , HORVU0Hr1G025390.10 , HORVU0Hr1G025390.3
Wheat TraesCS2B02G049300 , TraesCS2B02G049300 , TraesCS4A02G498200 , TraesCS4A02G496400 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS7D02G001800 , TraesCS7D02G001800 , TraesCS7D02G001800 , TraesCS7B02G131400 , TraesCS7B02G131400 , TraesCS7B02G131400 , TraesCS7B02G131400 , TraesCS7B02G131400 , TraesCS4A02G000600 , TraesCS6B02G139500 , TraesCS7D02G173700 , TraesCS7A02G232900 , TraesCS7A02G001700 , TraesCS4D02G000600 , TraesCS4D02G000600 , TraesCS4D02G000600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G222000 - -
2 Sobic.002G148166 - -
3 Sobic.005G002050 - -
4 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
5 Sobic.003G169300 chloroplast 30S ribosomal protein S2, putative, expressed K02967: RP-S2, MRPS2, small subunit ribosomal protein S2
6 Sobic.005G110493 - -
7 Sobic.003G173266 - K02956: RP-S15, MRPS15, small subunit ribosomal protein S15
8 Sobic.003G130200 embryonic protein DC-8, putative, expressed -
9 Sobic.004G251400 - -
10 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18
11 Sobic.002G150200 cytochrome c biogenesis protein ccsA, putative, expressed -
12 Sobic.001G266000 OsClp10 - Putative Clp protease homologue, expressed -
13 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
14 Sobic.003G166400 - K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
15 Sobic.004G087000 ATP synthase subunit beta, putative, expressed K02112: ATPF1B, F-type H+/Na+-transporting ATPase subunit beta
16 Sobic.004G337600 - -
17 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
18 Sobic.002G149966 - -
19 Sobic.003G172701 - -
20 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta


Gene co-expression network
sample Sobic010G254000 Sobic010G254000 Sobic002G222000 Sobic002G222000 Sobic010G254000--Sobic002G222000 Sobic002G148166 Sobic002G148166 Sobic010G254000--Sobic002G148166 Sobic005G002050 Sobic005G002050 Sobic010G254000--Sobic005G002050 Sobic003G172900 Sobic003G172900 Sobic010G254000--Sobic003G172900 Sobic003G169300 Sobic003G169300 Sobic010G254000--Sobic003G169300 Sobic005G110493 Sobic005G110493 Sobic010G254000--Sobic005G110493 Sobic003G173266 Sobic003G173266 Sobic010G254000--Sobic003G173266 Sobic003G130200 Sobic003G130200 Sobic010G254000--Sobic003G130200 Sobic004G251400 Sobic004G251400 Sobic010G254000--Sobic004G251400 Sobic002G222000--Sobic003G172900 Sobic002G222000--Sobic002G148166 Sobic002G222000--Sobic010G254000 Sobic002G222000--Sobic003G173266 Sobic001G266000 Sobic001G266000 Sobic002G222000--Sobic001G266000 Sobic002G222000--Sobic005G002050 Sobic002G222000--Sobic003G169300 Sobic002G222000--Sobic005G110493 Sobic002G222000--Sobic003G130200 Sobic002G150200 Sobic002G150200 Sobic002G148166--Sobic002G150200 Sobic002G148166--Sobic003G130200 Sobic003G172701 Sobic003G172701 Sobic002G148166--Sobic003G172701 Sobic002G148166--Sobic005G110493 Sobic004G210400 Sobic004G210400 Sobic002G148166--Sobic004G210400 Sobic002G148166--Sobic005G002050 Sobic002G148166--Sobic003G169300 Sobic004G087000 Sobic004G087000 Sobic002G148166--Sobic004G087000 Sobic002G148166--Sobic002G222000 Sobic005G002050--Sobic003G130200 Sobic005G002050--Sobic002G150200 Sobic005G002050--Sobic002G148166 Sobic005G002050--Sobic010G254000 Sobic005G002050--Sobic004G210400 Sobic005G002050--Sobic002G222000 Sobic003G168425 Sobic003G168425 Sobic005G002050--Sobic003G168425 Sobic005G002050--Sobic005G110493 Sobic003G166400 Sobic003G166400 Sobic005G002050--Sobic003G166400 Sobic003G172900--Sobic004G251400 Sobic002G150032 Sobic002G150032 Sobic003G172900--Sobic002G150032 Sobic003G172900--Sobic001G266000 Sobic003G172900--Sobic003G173266 Sobic003G172900--Sobic004G087000 Sobic003G172850 Sobic003G172850 Sobic003G172900--Sobic003G172850 Sobic002G044500 Sobic002G044500 Sobic003G172900--Sobic002G044500 Sobic003G172900--Sobic002G222000 Sobic002G149966 Sobic002G149966 Sobic003G172900--Sobic002G149966 Sobic003G169300--Sobic005G110493 Sobic003G169300--Sobic003G168425 Sobic003G169300--Sobic003G173266 Sobic010G052866 Sobic010G052866 Sobic003G169300--Sobic010G052866 Sobic004G087050 Sobic004G087050 Sobic003G169300--Sobic004G087050 Sobic003G169300--Sobic003G172701 Sobic003G172500 Sobic003G172500 Sobic003G169300--Sobic003G172500 Sobic003G169300--Sobic002G148166 Sobic003G169300--Sobic004G251400 Sobic005G110493--Sobic003G169300 Sobic005G110493--Sobic003G168425 Sobic005G110493--Sobic004G087050 Sobic005G110493--Sobic003G172701 Sobic010G139200 Sobic010G139200 Sobic005G110493--Sobic010G139200 Sobic005G110493--Sobic003G172500 Sobic005G110493--Sobic003G130200 Sobic005G110493--Sobic002G148166 Sobic005G110493--Sobic010G052866 Sobic003G173266--Sobic003G169300 Sobic003G173266--Sobic003G172900 Sobic003G173266--Sobic003G172850 Sobic003G173266--Sobic001G266000 Sobic003G173266--Sobic004G251400 Sobic003G173266--Sobic002G222000 Sobic003G173266--Sobic005G110493 Sobic003G173266--Sobic002G148166 Sobic003G173266--Sobic010G052866 Sobic003G130200--Sobic002G150200 Sobic003G130200--Sobic004G210400 Sobic003G130200--Sobic002G148166 Sobic003G130200--Sobic005G002050 Sobic003G130200--Sobic005G110493 Sobic003G130200--Sobic003G168425 Sobic003G130200--Sobic003G169300 Sobic003G130200--Sobic010G139200 Sobic003G130200--Sobic004G087050 Sobic004G251400--Sobic003G172900 Sobic004G251400--Sobic004G087000 Sobic007G109200 Sobic007G109200 Sobic004G251400--Sobic007G109200 Sobic004G251400--Sobic003G173266 Sobic004G251400--Sobic003G169300 Sobic004G251400--Sobic003G172850 Sobic004G337600 Sobic004G337600 Sobic004G251400--Sobic004G337600 Sobic004G251400--Sobic003G172701 Sobic004G251400--Sobic005G110493
Octagon: transcription factors


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